Model info
| Transcription factor | MEF2B | ||||||||
| Model | MEF2B_HUMAN.H10MO.D | ||||||||
| Model type | Mononucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Origin | HT-SELEX | ||||||||
| Model length | 16 | ||||||||
| Quality | D | ||||||||
| Consensus | bGWTRCTATWAATAGh | ||||||||
| wAUC | |||||||||
| Best AUC | |||||||||
| Benchmark datasets | |||||||||
| Aligned words | 126 | ||||||||
| TF family | Regulators of differentiation{5.1.1} | ||||||||
| TF subfamily | MEF-2{5.1.1.1} | ||||||||
| HGNC | 6995 | ||||||||
| EntrezGene | 100271849; 4207 | ||||||||
| UniProt ID | MEF2B_HUMAN | ||||||||
| UniProt AC | Q02080 | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
|
PCM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 16.75 | 21.75 | 17.75 | 69.75 |
| 02 | 6.0 | 5.0 | 103.0 | 12.0 |
| 03 | 24.75 | 3.75 | 18.75 | 78.75 |
| 04 | 7.25 | 2.25 | 5.25 | 111.25 |
| 05 | 55.0 | 0.0 | 65.0 | 6.0 |
| 06 | 0.0 | 125.0 | 1.0 | 0.0 |
| 07 | 0.0 | 0.0 | 0.0 | 126.0 |
| 08 | 125.0 | 0.0 | 1.0 | 0.0 |
| 09 | 29.0 | 0.0 | 0.0 | 97.0 |
| 10 | 57.0 | 0.0 | 1.0 | 68.0 |
| 11 | 68.0 | 0.0 | 0.0 | 58.0 |
| 12 | 103.0 | 0.0 | 0.0 | 23.0 |
| 13 | 0.0 | 1.0 | 0.0 | 125.0 |
| 14 | 126.0 | 0.0 | 0.0 | 0.0 |
| 15 | 7.25 | 5.25 | 107.25 | 6.25 |
| 16 | 28.75 | 59.75 | 13.75 | 23.75 |
PWM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | -0.6 | -0.354 | -0.545 | 0.774 |
| 02 | -1.512 | -1.662 | 1.159 | -0.907 |
| 03 | -0.231 | -1.886 | -0.494 | 0.894 |
| 04 | -1.352 | -2.247 | -1.622 | 1.235 |
| 05 | 0.541 | -3.298 | 0.705 | -1.512 |
| 06 | -3.298 | 1.35 | -2.695 | -3.298 |
| 07 | -3.298 | -3.298 | -3.298 | 1.358 |
| 08 | 1.35 | -3.298 | -2.695 | -3.298 |
| 09 | -0.08 | -3.298 | -3.298 | 1.099 |
| 10 | 0.576 | -3.298 | -2.695 | 0.749 |
| 11 | 0.749 | -3.298 | -3.298 | 0.593 |
| 12 | 1.159 | -3.298 | -3.298 | -0.301 |
| 13 | -3.298 | -2.695 | -3.298 | 1.35 |
| 14 | 1.358 | -3.298 | -3.298 | -3.298 |
| 15 | -1.352 | -1.622 | 1.199 | -1.478 |
| 16 | -0.088 | 0.623 | -0.782 | -0.27 |