Model info
| Transcription factor | Mef2a | ||||||||
| Model | MEF2A_MOUSE.H10MO.B | ||||||||
| Model type | Mononucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Origin | HOCOMOCO v9 | ||||||||
| Model length | 14 | ||||||||
| Quality | B | ||||||||
| Consensus | dddYTATTTATAGh | ||||||||
| wAUC | |||||||||
| Best AUC | |||||||||
| Benchmark datasets | |||||||||
| Aligned words | 143 | ||||||||
| TF family | Regulators of differentiation{5.1.1} | ||||||||
| TF subfamily | MEF-2{5.1.1.1} | ||||||||
| MGI | 99532 | ||||||||
| EntrezGene | 17258 | ||||||||
| UniProt ID | MEF2A_MOUSE | ||||||||
| UniProt AC | Q60929 | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
|
PCM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 48.844 | 16.032 | 52.888 | 25.236 |
| 02 | 42.331 | 9.739 | 43.727 | 47.204 |
| 03 | 19.42 | 8.899 | 54.864 | 59.816 |
| 04 | 1.178 | 104.769 | 10.141 | 26.913 |
| 05 | 1.47 | 1.47 | 0.0 | 140.061 |
| 06 | 137.56 | 1.913 | 1.323 | 2.204 |
| 07 | 8.823 | 3.236 | 0.0 | 130.941 |
| 08 | 33.032 | 0.0 | 0.0 | 109.968 |
| 09 | 26.191 | 0.735 | 0.0 | 116.074 |
| 10 | 77.105 | 0.0 | 0.0 | 65.895 |
| 11 | 7.794 | 0.735 | 0.0 | 134.471 |
| 12 | 138.586 | 0.0 | 4.414 | 0.0 |
| 13 | 16.843 | 0.367 | 119.465 | 6.325 |
| 14 | 52.334 | 65.288 | 10.481 | 14.898 |
PWM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 0.303 | -0.762 | 0.381 | -0.334 |
| 02 | 0.164 | -1.215 | 0.195 | 0.27 |
| 03 | -0.582 | -1.294 | 0.417 | 0.501 |
| 04 | -2.727 | 1.053 | -1.179 | -0.273 |
| 05 | -2.614 | -2.614 | -3.395 | 1.34 |
| 06 | 1.322 | -2.462 | -2.669 | -2.374 |
| 07 | -1.302 | -2.112 | -3.395 | 1.274 |
| 08 | -0.076 | -3.395 | -3.395 | 1.101 |
| 09 | -0.299 | -2.93 | -3.395 | 1.154 |
| 10 | 0.75 | -3.395 | -3.395 | 0.596 |
| 11 | -1.41 | -2.93 | -3.395 | 1.3 |
| 12 | 1.33 | -3.395 | -1.878 | -3.395 |
| 13 | -0.716 | -3.136 | 1.183 | -1.587 |
| 14 | 0.37 | 0.587 | -1.149 | -0.829 |