Model info
| Transcription factor | MEF2A | ||||||||
| Model | MEF2A_HUMAN.H10MO.A | ||||||||
| Model type | Mononucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Origin | ChIP-Seq | ||||||||
| Model length | 13 | ||||||||
| Quality | A | ||||||||
| Consensus | ddCTATTTWKARh | ||||||||
| wAUC | 0.8798656394757345 | ||||||||
| Best AUC | 0.9204062466525178 | ||||||||
| Benchmark datasets | 4 | ||||||||
| Aligned words | 438 | ||||||||
| TF family | Regulators of differentiation{5.1.1} | ||||||||
| TF subfamily | MEF-2{5.1.1.1} | ||||||||
| HGNC | 6993 | ||||||||
| EntrezGene | 4205 | ||||||||
| UniProt ID | MEF2A_HUMAN | ||||||||
| UniProt AC | Q02078 | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
|
PCM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 118.737 | 27.973 | 135.281 | 154.909 |
| 02 | 34.915 | 30.63 | 191.188 | 180.168 |
| 03 | 10.131 | 352.278 | 12.052 | 62.439 |
| 04 | 1.855 | 24.038 | 0.0 | 411.008 |
| 05 | 409.219 | 7.001 | 14.634 | 6.048 |
| 06 | 25.99 | 7.968 | 0.0 | 402.943 |
| 07 | 32.88 | 2.813 | 3.1 | 398.108 |
| 08 | 11.192 | 16.437 | 1.033 | 408.239 |
| 09 | 81.328 | 52.457 | 3.611 | 299.506 |
| 10 | 40.296 | 12.589 | 43.322 | 340.695 |
| 11 | 262.668 | 0.891 | 173.341 | 0.0 |
| 12 | 45.073 | 25.971 | 321.234 | 44.623 |
| 13 | 163.465 | 177.539 | 44.082 | 51.814 |
PWM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 0.082 | -1.323 | 0.211 | 0.345 |
| 02 | -1.112 | -1.237 | 0.554 | 0.495 |
| 03 | -2.252 | 1.161 | -2.099 | -0.549 |
| 04 | -3.491 | -1.466 | -4.289 | 1.315 |
| 05 | 1.311 | -2.565 | -1.925 | -2.683 |
| 06 | -1.393 | -2.457 | -4.289 | 1.295 |
| 07 | -1.169 | -3.241 | -3.177 | 1.283 |
| 08 | -2.165 | -1.819 | -3.77 | 1.308 |
| 09 | -0.29 | -0.719 | -3.072 | 1.0 |
| 10 | -0.974 | -2.06 | -0.904 | 1.128 |
| 11 | 0.869 | -3.827 | 0.457 | -4.289 |
| 12 | -0.866 | -1.393 | 1.07 | -0.875 |
| 13 | 0.399 | 0.48 | -0.887 | -0.731 |