Model info
| Transcription factor | MECP2 | ||||||||
| Model | MECP2_HUMAN.H10MO.C | ||||||||
| Model type | Mononucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Origin | HOCOMOCO v9 | ||||||||
| Model length | 7 | ||||||||
| Quality | C | ||||||||
| Consensus | SCCGGAG | ||||||||
| wAUC | |||||||||
| Best AUC | |||||||||
| Benchmark datasets | |||||||||
| Aligned words | 122 | ||||||||
| TF family | |||||||||
| TF subfamily | |||||||||
| HGNC | 6990 | ||||||||
| EntrezGene | 4204 | ||||||||
| UniProt ID | MECP2_HUMAN | ||||||||
| UniProt AC | P51608 | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
|
PCM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 2.966 | 70.176 | 42.496 | 2.966 |
| 02 | 0.0 | 118.604 | 0.0 | 0.0 |
| 03 | 0.0 | 118.604 | 0.0 | 0.0 |
| 04 | 0.0 | 0.0 | 118.604 | 0.0 |
| 05 | 0.0 | 0.0 | 118.604 | 0.0 |
| 06 | 68.206 | 0.0 | 50.399 | 0.0 |
| 07 | 52.388 | 0.0 | 66.216 | 0.0 |
PWM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | -2.004 | 0.839 | 0.348 | -2.004 |
| 02 | -3.252 | 1.357 | -3.252 | -3.252 |
| 03 | -3.252 | 1.357 | -3.252 | -3.252 |
| 04 | -3.252 | -3.252 | 1.357 | -3.252 |
| 05 | -3.252 | -3.252 | 1.357 | -3.252 |
| 06 | 0.811 | -3.252 | 0.514 | -3.252 |
| 07 | 0.552 | -3.252 | 0.782 | -3.252 |