Transcription factor | MBD2 | ||||||||
Model | MBD2_HUMAN.H10MO.B | ||||||||
Model type | Mononucleotide PWM | ||||||||
LOGO | |||||||||
LOGO (reverse complement) | |||||||||
Origin | HOCOMOCO v9 | ||||||||
Model length | 11 | ||||||||
Quality | B | ||||||||
Consensus | nSGGCCGGMKv | ||||||||
wAUC | |||||||||
Best AUC | |||||||||
Benchmark datasets | |||||||||
Aligned words | 113 | ||||||||
TF family | |||||||||
TF subfamily | |||||||||
HGNC | 6917 | ||||||||
EntrezGene | 8932 | ||||||||
UniProt ID | MBD2_HUMAN | ||||||||
UniProt AC | Q9UBB5 | ||||||||
Comment | |||||||||
Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
Standard thresholds |
|
A | C | G | T | |
---|---|---|---|---|
01 | 16.778 | 44.413 | 44.413 | 4.935 |
02 | 5.922 | 43.426 | 51.322 | 9.87 |
03 | 0.0 | 27.635 | 82.904 | 0.0 |
04 | 0.0 | 0.0 | 57.243 | 53.295 |
05 | 0.0 | 110.539 | 0.0 | 0.0 |
06 | 0.0 | 110.539 | 0.0 | 0.0 |
07 | 0.0 | 0.0 | 110.539 | 0.0 |
08 | 0.0 | 0.0 | 110.539 | 0.0 |
09 | 59.217 | 39.478 | 11.843 | 0.0 |
10 | 11.843 | 11.843 | 65.139 | 21.713 |
11 | 35.53 | 13.817 | 53.295 | 7.896 |
A | C | G | T | |
---|---|---|---|---|
01 | -0.473 | 0.459 | 0.459 | -1.551 |
02 | -1.401 | 0.437 | 0.6 | -0.959 |
03 | -3.198 | 0.0 | 1.071 | -3.198 |
04 | -3.198 | -3.198 | 0.707 | 0.637 |
05 | -3.198 | 1.355 | -3.198 | -3.198 |
06 | -3.198 | 1.355 | -3.198 | -3.198 |
07 | -3.198 | -3.198 | 1.355 | -3.198 |
08 | -3.198 | -3.198 | 1.355 | -3.198 |
09 | 0.74 | 0.344 | -0.794 | -3.198 |
10 | -0.794 | -0.794 | 0.834 | -0.23 |
11 | 0.242 | -0.653 | 0.637 | -1.156 |