Model info
| Transcription factor | Klf4 | ||||||||
| Model | KLF4_MOUSE.H10MO.C | ||||||||
| Model type | Mononucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Origin | ChIP-Seq | ||||||||
| Model length | 12 | ||||||||
| Quality | C | ||||||||
| Consensus | WGGGYGKGGYbb | ||||||||
| wAUC | 0.9234290797584314 | ||||||||
| Best AUC | 0.9234290797584314 | ||||||||
| Benchmark datasets | 1 | ||||||||
| Aligned words | 501 | ||||||||
| TF family | Three-zinc finger Krüppel-related factors{2.3.1} | ||||||||
| TF subfamily | Krüppel-like factors{2.3.1.2} | ||||||||
| MGI | 1342287 | ||||||||
| EntrezGene | 16600 | ||||||||
| UniProt ID | KLF4_MOUSE | ||||||||
| UniProt AC | Q60793 | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
|
PCM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 202.027 | 6.884 | 80.272 | 210.817 |
| 02 | 4.871 | 0.0 | 495.129 | 0.0 |
| 03 | 1.054 | 1.013 | 497.933 | 0.0 |
| 04 | 0.918 | 1.189 | 495.812 | 2.081 |
| 05 | 7.999 | 223.368 | 3.238 | 265.395 |
| 06 | 0.0 | 0.99 | 499.01 | 0.0 |
| 07 | 5.277 | 7.297 | 221.669 | 265.757 |
| 08 | 59.149 | 5.383 | 409.709 | 25.759 |
| 09 | 10.926 | 13.082 | 433.475 | 42.516 |
| 10 | 13.917 | 318.523 | 34.329 | 133.231 |
| 11 | 51.322 | 254.237 | 71.529 | 122.913 |
| 12 | 54.839 | 182.527 | 168.35 | 94.284 |
PWM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 0.475 | -2.708 | -0.436 | 0.518 |
| 02 | -2.981 | -4.4 | 1.367 | -4.4 |
| 03 | -3.882 | -3.898 | 1.373 | -4.4 |
| 04 | -3.936 | -3.832 | 1.369 | -3.55 |
| 05 | -2.584 | 0.575 | -3.274 | 0.746 |
| 06 | -4.4 | -3.907 | 1.375 | -4.4 |
| 07 | -2.919 | -2.66 | 0.568 | 0.748 |
| 08 | -0.735 | -2.904 | 1.179 | -1.533 |
| 09 | -2.317 | -2.157 | 1.235 | -1.055 |
| 10 | -2.102 | 0.928 | -1.26 | 0.063 |
| 11 | -0.873 | 0.704 | -0.549 | -0.017 |
| 12 | -0.808 | 0.375 | 0.295 | -0.278 |