KLF3_MOUSE.H10MO.D motif - HOmo sapiens COmprehensive MOdel COllection

Model info

Transcription factor

Klf3

Model

KLF3_MOUSE.H10MO.D

Model type

Mononucleotide PWM

LOGO

LOGO (reverse complement)

Origin

HOCOMOCO v9

Model length

15

Quality

D

Consensus

WRChWGGGTGTSGnW

wAUC

Best AUC

Benchmark datasets

Aligned words

8

TF family

Three-zinc finger Krüppel-related factors{2.3.1}

TF subfamily

Krüppel-like factors{2.3.1.2}

MGI

1342773

EntrezGene

16599

UniProt ID

KLF3_MOUSE

UniProt AC

Q60980

Comment

Downloads

pcm
pwm
alignment
threshold to P-value grid

Standard thresholds

P-value	Threshold
0.001	4.8551
0.0005	5.5671
0.0001	7.0431

PCM

	A	C	G	T
01	2.625	2.125	0.0	3.25
02	3.125	1.125	3.75	0.0
03	0.0	6.375	1.0	0.625
04	1.125	3.125	1.0	2.75
05	2.75	0.0	1.0	4.25
06	1.125	0.0	6.875	0.0
07	0.0	0.0	6.875	1.125
08	0.0	0.0	8.0	0.0
09	0.0	0.0	0.0	8.0
10	1.125	0.0	6.875	0.0
11	0.0	0.0	3.125	4.875
12	1.125	2.125	4.75	0.0
13	0.0	1.0	5.875	1.125
14	1.625	4.125	1.125	1.125
15	1.906	0.281	0.281	5.531

PWM

	A	C	G	T
01	0.222	0.048	-1.578	0.403
02	0.369	-0.427	0.527	-1.578
03	-1.578	1.007	-0.506	-0.789
04	-0.427	0.369	-0.506	0.261
05	0.261	-1.578	-0.506	0.638
06	-0.427	-1.578	1.077	-1.578
07	-1.578	-1.578	1.077	-0.427
08	-1.578	-1.578	1.218	-1.578
09	-1.578	-1.578	-1.578	1.218
10	-0.427	-1.578	1.077	-1.578
11	-1.578	-1.578	0.369	0.761
12	-0.427	0.048	0.738	-1.578
13	-1.578	-0.506	0.931	-0.427
14	-0.161	0.612	-0.427	-0.427
15	-0.038	-1.146	-1.146	0.876