Model info
| Transcription factor | Klf1 | ||||||||
| Model | KLF1_MOUSE.H10MO.C | ||||||||
| Model type | Mononucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Origin | HOCOMOCO v9 | ||||||||
| Model length | 11 | ||||||||
| Quality | C | ||||||||
| Consensus | bWGGGTGnGGb | ||||||||
| wAUC | |||||||||
| Best AUC | |||||||||
| Benchmark datasets | |||||||||
| Aligned words | 11 | ||||||||
| TF family | Three-zinc finger Krüppel-related factors{2.3.1} | ||||||||
| TF subfamily | Krüppel-like factors{2.3.1.2} | ||||||||
| MGI | 1342771 | ||||||||
| EntrezGene | |||||||||
| UniProt ID | KLF1_MOUSE | ||||||||
| UniProt AC | P46099 | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
|
PCM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 1.252 | 5.391 | 2.233 | 2.124 |
| 02 | 6.208 | 0.0 | 1.96 | 2.832 |
| 03 | 0.98 | 0.98 | 9.04 | 0.0 |
| 04 | 0.0 | 0.0 | 11.0 | 0.0 |
| 05 | 0.0 | 0.0 | 11.0 | 0.0 |
| 06 | 0.0 | 0.0 | 0.0 | 11.0 |
| 07 | 0.0 | 0.0 | 11.0 | 0.0 |
| 08 | 0.98 | 0.98 | 3.812 | 5.228 |
| 09 | 0.98 | 0.0 | 10.02 | 0.0 |
| 10 | 0.0 | 0.98 | 10.02 | 0.0 |
| 11 | 1.389 | 6.616 | 1.498 | 1.498 |
PWM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | -0.593 | 0.581 | -0.168 | -0.207 |
| 02 | 0.709 | -1.721 | -0.269 | 0.024 |
| 03 | -0.752 | -0.752 | 1.057 | -1.721 |
| 04 | -1.721 | -1.721 | 1.242 | -1.721 |
| 05 | -1.721 | -1.721 | 1.242 | -1.721 |
| 06 | -1.721 | -1.721 | -1.721 | 1.242 |
| 07 | -1.721 | -1.721 | 1.242 | -1.721 |
| 08 | -0.752 | -0.752 | 0.275 | 0.554 |
| 09 | -0.752 | -1.721 | 1.154 | -1.721 |
| 10 | -1.721 | -0.752 | 1.154 | -1.721 |
| 11 | -0.522 | 0.767 | -0.468 | -0.468 |