Model info
| Transcription factor | Jun | ||||||||
| Model | JUN_MOUSE.H10MO.A | ||||||||
| Model type | Mononucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Origin | HOCOMOCO v9 | ||||||||
| Model length | 9 | ||||||||
| Quality | A | ||||||||
| Consensus | vTGAGTCAb | ||||||||
| wAUC | 0.7257210624644428 | ||||||||
| Best AUC | 0.7257210624644428 | ||||||||
| Benchmark datasets | 1 | ||||||||
| Aligned words | 2361 | ||||||||
| TF family | Jun-related factors{1.1.1} | ||||||||
| TF subfamily | Jun factors{1.1.1.1} | ||||||||
| MGI | 96646 | ||||||||
| EntrezGene | 16476 | ||||||||
| UniProt ID | JUN_MOUSE | ||||||||
| UniProt AC | P05627 | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
|
PCM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 865.787 | 574.768 | 519.876 | 265.105 |
| 02 | 58.65 | 58.382 | 96.837 | 2011.667 |
| 03 | 69.514 | 66.52 | 1940.175 | 149.327 |
| 04 | 1975.195 | 128.029 | 23.733 | 98.579 |
| 05 | 298.96 | 1.243 | 1925.333 | 0.0 |
| 06 | 49.536 | 19.879 | 15.616 | 2140.504 |
| 07 | 70.655 | 2123.127 | 22.672 | 9.082 |
| 08 | 2186.85 | 18.082 | 7.854 | 12.75 |
| 09 | 101.403 | 816.537 | 437.696 | 869.899 |
PWM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 0.441 | 0.032 | -0.068 | -0.738 |
| 02 | -2.221 | -2.225 | -1.732 | 1.283 |
| 03 | -2.056 | -2.099 | 1.247 | -1.306 |
| 04 | 1.264 | -1.458 | -3.08 | -1.715 |
| 05 | -0.618 | -5.171 | 1.239 | -5.669 |
| 06 | -2.384 | -3.243 | -3.46 | 1.345 |
| 07 | -2.04 | 1.337 | -3.122 | -3.926 |
| 08 | 1.366 | -3.329 | -4.045 | -3.639 |
| 09 | -1.687 | 0.383 | -0.239 | 0.446 |