Transcription factor | JDP2 | ||||||||
Model | JDP2_HUMAN.H10MO.D | ||||||||
Model type | Mononucleotide PWM | ||||||||
LOGO | |||||||||
LOGO (reverse complement) | |||||||||
Origin | HT-SELEX | ||||||||
Model length | 12 | ||||||||
Quality | D | ||||||||
Consensus | bRATGACGTCAb | ||||||||
wAUC | |||||||||
Best AUC | |||||||||
Benchmark datasets | |||||||||
Aligned words | 2851 | ||||||||
TF family | Fos-related factors{1.1.2} | ||||||||
TF subfamily | ATF-3-like factors{1.1.2.2} | ||||||||
HGNC | 17546 | ||||||||
EntrezGene | 122953 | ||||||||
UniProt ID | JDP2_HUMAN | ||||||||
UniProt AC | Q8WYK2 | ||||||||
Comment | |||||||||
Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
Standard thresholds |
|
A | C | G | T | |
---|---|---|---|---|
01 | 400.863 | 770.315 | 686.692 | 1177.231 |
02 | 446.614 | 357.567 | 1972.795 | 258.125 |
03 | 2553.824 | 70.781 | 366.181 | 44.314 |
04 | 5.556 | 1.648 | 2.414 | 3025.483 |
05 | 4.945 | 1.803 | 2997.892 | 30.461 |
06 | 3031.113 | 1.611 | 1.611 | 0.766 |
07 | 3.29 | 2941.111 | 6.525 | 84.175 |
08 | 24.99 | 1.46 | 3004.894 | 3.757 |
09 | 11.942 | 17.988 | 14.992 | 2990.179 |
10 | 477.665 | 2455.6 | 56.78 | 45.055 |
11 | 2881.453 | 48.127 | 53.566 | 51.955 |
12 | 136.109 | 1156.326 | 359.75 | 1382.916 |
A | C | G | T | |
---|---|---|---|---|
01 | -0.636 | 0.015 | -0.1 | 0.438 |
02 | -0.528 | -0.749 | 0.954 | -1.073 |
03 | 1.212 | -2.347 | -0.726 | -2.799 |
04 | -4.611 | -5.339 | -5.149 | 1.381 |
05 | -4.696 | -5.297 | 1.372 | -3.154 |
06 | 1.383 | -5.349 | -5.349 | -5.615 |
07 | -4.968 | 1.353 | -4.491 | -2.178 |
08 | -3.339 | -5.392 | 1.374 | -4.883 |
09 | -3.999 | -3.639 | -3.801 | 1.369 |
10 | -0.461 | 1.173 | -2.56 | -2.783 |
11 | 1.332 | -2.72 | -2.617 | -2.646 |
12 | -1.706 | 0.42 | -0.743 | 0.599 |