Model info
| Transcription factor | Isl1 | ||||||||
| Model | ISL1_MOUSE.H10MO.D | ||||||||
| Model type | Mononucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Origin | HOCOMOCO v9 | ||||||||
| Model length | 7 | ||||||||
| Quality | D | ||||||||
| Consensus | SYTAATG | ||||||||
| wAUC | |||||||||
| Best AUC | |||||||||
| Benchmark datasets | |||||||||
| Aligned words | 13 | ||||||||
| TF family | HD-LIM factors{3.1.5} | ||||||||
| TF subfamily | ISL{3.1.5.1} | ||||||||
| MGI | 101791 | ||||||||
| EntrezGene | 16392 | ||||||||
| UniProt ID | ISL1_MOUSE | ||||||||
| UniProt AC | P61372 | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
|
PCM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 0.371 | 5.616 | 6.643 | 0.371 |
| 02 | 0.0 | 4.675 | 2.281 | 6.044 |
| 03 | 1.14 | 0.0 | 0.0 | 11.86 |
| 04 | 13.0 | 0.0 | 0.0 | 0.0 |
| 05 | 13.0 | 0.0 | 0.0 | 0.0 |
| 06 | 0.0 | 0.0 | 0.0 | 13.0 |
| 07 | 5.36 | 0.0 | 7.64 | 0.0 |
PWM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | -1.347 | 0.475 | 0.627 | -1.347 |
| 02 | -1.803 | 0.312 | -0.286 | 0.541 |
| 03 | -0.781 | -1.803 | -1.803 | 1.167 |
| 04 | 1.254 | -1.803 | -1.803 | -1.803 |
| 05 | 1.254 | -1.803 | -1.803 | -1.803 |
| 06 | -1.803 | -1.803 | -1.803 | 1.254 |
| 07 | 0.433 | -1.803 | 0.755 | -1.803 |