Model info
| Transcription factor | Irf8 | ||||||||
| Model | IRF8_MOUSE.H10MO.D | ||||||||
| Model type | Mononucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Origin | HOCOMOCO v9 | ||||||||
| Model length | 15 | ||||||||
| Quality | D | ||||||||
| Consensus | vvRAAAvYGAAAvYv | ||||||||
| wAUC | |||||||||
| Best AUC | |||||||||
| Benchmark datasets | |||||||||
| Aligned words | 37 | ||||||||
| TF family | Interferon-regulatory factors{3.5.3} | ||||||||
| TF subfamily | IRF-8 (ICSBP1){3.5.3.0.8} | ||||||||
| MGI | 96395 | ||||||||
| EntrezGene | 15900 | ||||||||
| UniProt ID | IRF8_MOUSE | ||||||||
| UniProt AC | P23611 | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
|
PCM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 6.254 | 6.118 | 19.238 | 5.166 |
| 02 | 17.199 | 3.807 | 12.78 | 2.991 |
| 03 | 5.302 | 2.175 | 28.211 | 1.088 |
| 04 | 20.394 | 0.0 | 16.383 | 0.0 |
| 05 | 35.689 | 0.0 | 1.088 | 0.0 |
| 06 | 33.921 | 0.68 | 1.088 | 1.088 |
| 07 | 9.585 | 13.596 | 13.596 | 0.0 |
| 08 | 3.943 | 4.351 | 3.263 | 25.22 |
| 09 | 0.0 | 2.447 | 33.513 | 0.816 |
| 10 | 34.737 | 0.0 | 2.039 | 0.0 |
| 11 | 33.445 | 1.699 | 1.631 | 0.0 |
| 12 | 32.222 | 0.0 | 2.855 | 1.699 |
| 13 | 5.982 | 13.324 | 12.644 | 4.826 |
| 14 | 1.088 | 13.46 | 4.079 | 18.15 |
| 15 | 13.086 | 4.657 | 14.989 | 4.045 |
PWM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | -0.344 | -0.363 | 0.691 | -0.509 |
| 02 | 0.584 | -0.763 | 0.304 | -0.953 |
| 03 | -0.487 | -1.188 | 1.059 | -1.625 |
| 04 | 0.746 | -2.416 | 0.538 | -2.416 |
| 05 | 1.288 | -2.416 | -1.625 | -2.416 |
| 06 | 1.238 | -1.854 | -1.625 | -1.625 |
| 07 | 0.038 | 0.362 | 0.362 | -2.416 |
| 08 | -0.734 | -0.653 | -0.886 | 0.951 |
| 09 | -2.416 | -1.104 | 1.226 | -1.772 |
| 10 | 1.261 | -2.416 | -1.233 | -2.416 |
| 11 | 1.224 | -1.356 | -1.383 | -2.416 |
| 12 | 1.188 | -2.416 | -0.989 | -1.356 |
| 13 | -0.383 | 0.343 | 0.294 | -0.567 |
| 14 | -1.625 | 0.352 | -0.707 | 0.635 |
| 15 | 0.326 | -0.597 | 0.454 | -0.714 |