Model info
| Transcription factor | IRF4 | ||||||||
| Model | IRF4_HUMAN.H10MO.C | ||||||||
| Model type | Mononucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Origin | ChIP-Seq | ||||||||
| Model length | 16 | ||||||||
| Quality | C | ||||||||
| Consensus | dddRvGGAASWGRRWv | ||||||||
| wAUC | 0.7492777172118277 | ||||||||
| Best AUC | 0.7691946944503746 | ||||||||
| Benchmark datasets | 2 | ||||||||
| Aligned words | 502 | ||||||||
| TF family | Interferon-regulatory factors{3.5.3} | ||||||||
| TF subfamily | IRF-4 (LSIRF, NF-EM5, MUM1, Pip){3.5.3.0.4} | ||||||||
| HGNC | 6119 | ||||||||
| EntrezGene | 3662 | ||||||||
| UniProt ID | IRF4_HUMAN | ||||||||
| UniProt AC | Q15306 | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
|
PCM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 220.038 | 38.054 | 157.955 | 83.953 |
| 02 | 206.635 | 45.034 | 178.255 | 70.077 |
| 03 | 212.687 | 35.424 | 164.442 | 87.447 |
| 04 | 126.065 | 49.469 | 292.116 | 32.349 |
| 05 | 241.042 | 40.204 | 182.353 | 36.401 |
| 06 | 100.308 | 1.898 | 378.649 | 19.145 |
| 07 | 72.29 | 23.22 | 402.375 | 2.115 |
| 08 | 460.848 | 12.883 | 19.204 | 7.065 |
| 09 | 401.414 | 3.401 | 72.734 | 22.451 |
| 10 | 63.543 | 146.547 | 278.581 | 11.328 |
| 11 | 96.273 | 27.548 | 61.623 | 314.557 |
| 12 | 13.066 | 7.671 | 464.482 | 14.78 |
| 13 | 377.251 | 14.44 | 92.99 | 15.319 |
| 14 | 223.217 | 58.21 | 205.493 | 13.08 |
| 15 | 384.888 | 45.773 | 23.177 | 46.162 |
| 16 | 85.344 | 175.196 | 202.883 | 36.577 |
PWM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 0.56 | -1.162 | 0.231 | -0.392 |
| 02 | 0.498 | -0.999 | 0.351 | -0.569 |
| 03 | 0.526 | -1.23 | 0.271 | -0.352 |
| 04 | 0.008 | -0.908 | 0.842 | -1.317 |
| 05 | 0.651 | -1.109 | 0.374 | -1.204 |
| 06 | -0.217 | -3.602 | 1.1 | -1.811 |
| 07 | -0.539 | -1.631 | 1.161 | -3.541 |
| 08 | 1.296 | -2.171 | -1.808 | -2.687 |
| 09 | 1.158 | -3.24 | -0.533 | -1.662 |
| 10 | -0.665 | 0.157 | 0.795 | -2.285 |
| 11 | -0.257 | -1.47 | -0.695 | 0.915 |
| 12 | -2.158 | -2.619 | 1.304 | -2.047 |
| 13 | 1.096 | -2.068 | -0.292 | -2.015 |
| 14 | 0.574 | -0.75 | 0.492 | -2.157 |
| 15 | 1.116 | -0.984 | -1.633 | -0.975 |
| 16 | -0.376 | 0.334 | 0.48 | -1.2 |