Model info
Transcription factorIRF3
ModelIRF3_HUMAN.H10MO.C
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
OriginHOCOMOCO v9
Model length17
Quality
C
ConsensusRRAAASbGAAAvbdvdh
wAUC
Best AUC
Benchmark datasets
Aligned words46
TF familyInterferon-regulatory factors{3.5.3}
TF subfamilyIRF-3{3.5.3.0.3}
HGNC6118
EntrezGene3661
UniProt IDIRF3_HUMAN
UniProt ACQ14653
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 4.0921
0.0005 5.0441
0.0001 7.0271
PCM
ACGT
016.266.14728.583.087
029.6312.03930.7041.7
0339.3151.023.7390.0
0443.0540.00.01.02
0540.2220.01.8132.039
066.68511.21725.1531.02
075.66516.9958.61112.803
083.7390.90638.6350.793
0943.2810.00.7930.0
1043.0540.00.01.02
1142.4881.5860.00.0
128.72421.41410.8773.059
131.0214.95611.55716.542
1413.4832.94619.7147.931
1519.3746.91114.9562.833
1622.4334.07912.5764.985
1721.5277.1386.9118.498
PWM
ACGT
01-0.507-0.5230.903-1.087
02-0.123-1.3880.973-1.509
031.213-1.806-0.938-2.537
041.302-2.537-2.537-1.806
051.236-2.537-1.467-1.388
06-0.450.0160.78-1.806
07-0.5930.405-0.2250.139
08-0.938-1.8651.196-1.928
091.307-2.537-1.928-2.537
101.302-2.537-2.537-1.806
111.289-1.553-2.537-2.537
12-0.2130.625-0.012-1.094
13-1.8060.2840.0440.38
140.187-1.1230.546-0.298
150.53-0.420.284-1.153
160.67-0.8670.122-0.702
170.63-0.392-0.42-0.237