Transcription factor | Hoxd4 | ||||||||
Model | HXD4_MOUSE.H10MO.D | ||||||||
Model type | Mononucleotide PWM | ||||||||
LOGO | |||||||||
LOGO (reverse complement) | |||||||||
Origin | HOCOMOCO v9 | ||||||||
Model length | 8 | ||||||||
Quality | D | ||||||||
Consensus | KTAATTnW | ||||||||
wAUC | |||||||||
Best AUC | |||||||||
Benchmark datasets | |||||||||
Aligned words | 8 | ||||||||
TF family | HOX-related factors{3.1.1} | ||||||||
TF subfamily | HOX4{3.1.1.4} | ||||||||
MGI | 96208 | ||||||||
EntrezGene | 15436 | ||||||||
UniProt ID | HXD4_MOUSE | ||||||||
UniProt AC | P10628 | ||||||||
Comment | |||||||||
Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
Standard thresholds |
|
A | C | G | T | |
---|---|---|---|---|
01 | 0.247 | 0.247 | 2.219 | 5.288 |
02 | 0.0 | 0.0 | 0.0 | 8.0 |
03 | 6.027 | 0.986 | 0.986 | 0.0 |
04 | 7.014 | 0.0 | 0.986 | 0.0 |
05 | 0.0 | 0.0 | 0.0 | 8.0 |
06 | 0.0 | 0.0 | 0.0 | 8.0 |
07 | 0.986 | 0.986 | 4.055 | 1.973 |
08 | 3.315 | 0.247 | 1.233 | 3.205 |
A | C | G | T | |
---|---|---|---|---|
01 | -1.19 | -1.19 | 0.083 | 0.835 |
02 | -1.578 | -1.578 | -1.578 | 1.218 |
03 | 0.955 | -0.515 | -0.515 | -1.578 |
04 | 1.095 | -1.578 | -0.515 | -1.578 |
05 | -1.578 | -1.578 | -1.578 | 1.218 |
06 | -1.578 | -1.578 | -1.578 | 1.218 |
07 | -0.515 | -0.515 | 0.596 | -0.011 |
08 | 0.42 | -1.19 | -0.363 | 0.391 |