Transcription factor | Hoxc8 | ||||||||
Model | HXC8_MOUSE.H10MO.D | ||||||||
Model type | Mononucleotide PWM | ||||||||
LOGO | |||||||||
LOGO (reverse complement) | |||||||||
Origin | HOCOMOCO v9 | ||||||||
Model length | 14 | ||||||||
Quality | D | ||||||||
Consensus | nTTSATTRAnKSnn | ||||||||
wAUC | |||||||||
Best AUC | |||||||||
Benchmark datasets | |||||||||
Aligned words | 9 | ||||||||
TF family | HOX-related factors{3.1.1} | ||||||||
TF subfamily | HOX8{3.1.1.7} | ||||||||
MGI | 96198 | ||||||||
EntrezGene | 15426 | ||||||||
UniProt ID | HXC8_MOUSE | ||||||||
UniProt AC | P09025 | ||||||||
Comment | |||||||||
Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
Standard thresholds |
|
A | C | G | T | |
---|---|---|---|---|
01 | 1.492 | 2.503 | 1.492 | 3.514 |
02 | 0.0 | 0.0 | 2.022 | 6.978 |
03 | 0.0 | 1.011 | 0.0 | 7.989 |
04 | 0.91 | 3.034 | 5.056 | 0.0 |
05 | 8.09 | 0.0 | 0.0 | 0.91 |
06 | 2.022 | 0.0 | 0.0 | 6.978 |
07 | 1.921 | 0.0 | 0.0 | 7.079 |
08 | 3.944 | 0.0 | 4.045 | 1.011 |
09 | 9.0 | 0.0 | 0.0 | 0.0 |
10 | 1.011 | 1.011 | 1.011 | 5.966 |
11 | 2.022 | 0.0 | 4.045 | 2.933 |
12 | 1.921 | 4.045 | 3.034 | 0.0 |
13 | 1.011 | 3.944 | 3.034 | 1.011 |
14 | 1.517 | 4.449 | 1.517 | 1.517 |
A | C | G | T | |
---|---|---|---|---|
01 | -0.316 | 0.086 | -0.316 | 0.373 |
02 | -1.628 | -1.628 | -0.085 | 0.989 |
03 | -1.628 | -0.584 | -1.628 | 1.115 |
04 | -0.651 | 0.247 | 0.694 | -1.628 |
05 | 1.127 | -1.628 | -1.628 | -0.651 |
06 | -0.085 | -1.628 | -1.628 | 0.989 |
07 | -0.125 | -1.628 | -1.628 | 1.002 |
08 | 0.473 | -1.628 | 0.495 | -0.584 |
09 | 1.227 | -1.628 | -1.628 | -1.628 |
10 | -0.584 | -0.584 | -0.584 | 0.845 |
11 | -0.085 | -1.628 | 0.495 | 0.218 |
12 | -0.125 | 0.495 | 0.247 | -1.628 |
13 | -0.584 | 0.473 | 0.247 | -0.584 |
14 | -0.304 | 0.58 | -0.304 | -0.304 |