Model info
Transcription factorHOXA7
ModelHXA7_HUMAN.H10MO.D
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
OriginHOCOMOCO v9
Model length15
Quality
D
ConsensusvhTMnMnMGAKTRvv
wAUC
Best AUC
Benchmark datasets
Aligned words21
TF familyHOX-related factors{3.1.1}
TF subfamilyHOX6-7{3.1.1.6}
HGNC5108
EntrezGene3204
UniProt IDHXA7_HUMAN
UniProt ACP31268
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 4.9191
0.0005 5.5361
0.0001 6.8081
PCM
ACGT
016.7884.6655.7821.76
029.9445.0281.0063.017
034.0221.0060.013.966
042.90513.0731.0062.011
057.9333.0175.0283.017
0613.9663.0170.02.011
073.0172.9053.01710.056
089.9446.0340.03.017
090.01.00615.9782.011
1015.0841.8992.0110.0
110.02.0114.02212.961
121.0060.01.00616.983
134.0222.90512.0670.0
144.0222.90510.0562.011
157.2915.2793.2683.156
PWM
ACGT
010.316-0.0150.173-0.787
020.6660.05-1.147-0.379
03-0.142-1.147-2.0080.986
04-0.410.923-1.147-0.691
050.458-0.3790.05-0.379
060.986-0.379-2.008-0.691
07-0.379-0.41-0.3790.677
080.6660.21-2.008-0.379
09-2.008-1.1471.114-0.691
101.059-0.733-0.691-2.008
11-2.008-0.691-0.1420.915
12-1.147-2.008-1.1471.173
13-0.142-0.410.848-2.008
14-0.142-0.410.677-0.691
150.3810.092-0.315-0.343