Transcription factor | HOXA7 | ||||||||
Model | HXA7_HUMAN.H10MO.D | ||||||||
Model type | Mononucleotide PWM | ||||||||
LOGO | |||||||||
LOGO (reverse complement) | |||||||||
Origin | HOCOMOCO v9 | ||||||||
Model length | 15 | ||||||||
Quality | D | ||||||||
Consensus | vhTMnMnMGAKTRvv | ||||||||
wAUC | |||||||||
Best AUC | |||||||||
Benchmark datasets | |||||||||
Aligned words | 21 | ||||||||
TF family | HOX-related factors{3.1.1} | ||||||||
TF subfamily | HOX6-7{3.1.1.6} | ||||||||
HGNC | 5108 | ||||||||
EntrezGene | 3204 | ||||||||
UniProt ID | HXA7_HUMAN | ||||||||
UniProt AC | P31268 | ||||||||
Comment | |||||||||
Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
Standard thresholds |
|
A | C | G | T | |
---|---|---|---|---|
01 | 6.788 | 4.665 | 5.782 | 1.76 |
02 | 9.944 | 5.028 | 1.006 | 3.017 |
03 | 4.022 | 1.006 | 0.0 | 13.966 |
04 | 2.905 | 13.073 | 1.006 | 2.011 |
05 | 7.933 | 3.017 | 5.028 | 3.017 |
06 | 13.966 | 3.017 | 0.0 | 2.011 |
07 | 3.017 | 2.905 | 3.017 | 10.056 |
08 | 9.944 | 6.034 | 0.0 | 3.017 |
09 | 0.0 | 1.006 | 15.978 | 2.011 |
10 | 15.084 | 1.899 | 2.011 | 0.0 |
11 | 0.0 | 2.011 | 4.022 | 12.961 |
12 | 1.006 | 0.0 | 1.006 | 16.983 |
13 | 4.022 | 2.905 | 12.067 | 0.0 |
14 | 4.022 | 2.905 | 10.056 | 2.011 |
15 | 7.291 | 5.279 | 3.268 | 3.156 |
A | C | G | T | |
---|---|---|---|---|
01 | 0.316 | -0.015 | 0.173 | -0.787 |
02 | 0.666 | 0.05 | -1.147 | -0.379 |
03 | -0.142 | -1.147 | -2.008 | 0.986 |
04 | -0.41 | 0.923 | -1.147 | -0.691 |
05 | 0.458 | -0.379 | 0.05 | -0.379 |
06 | 0.986 | -0.379 | -2.008 | -0.691 |
07 | -0.379 | -0.41 | -0.379 | 0.677 |
08 | 0.666 | 0.21 | -2.008 | -0.379 |
09 | -2.008 | -1.147 | 1.114 | -0.691 |
10 | 1.059 | -0.733 | -0.691 | -2.008 |
11 | -2.008 | -0.691 | -0.142 | 0.915 |
12 | -1.147 | -2.008 | -1.147 | 1.173 |
13 | -0.142 | -0.41 | 0.848 | -2.008 |
14 | -0.142 | -0.41 | 0.677 | -0.691 |
15 | 0.381 | 0.092 | -0.315 | -0.343 |