Transcription factor | Hoxa5 | ||||||||
Model | HXA5_MOUSE.H10MO.D | ||||||||
Model type | Mononucleotide PWM | ||||||||
LOGO | |||||||||
LOGO (reverse complement) | |||||||||
Origin | HOCOMOCO v9 | ||||||||
Model length | 10 | ||||||||
Quality | D | ||||||||
Consensus | YTvATTARYR | ||||||||
wAUC | |||||||||
Best AUC | |||||||||
Benchmark datasets | |||||||||
Aligned words | 54 | ||||||||
TF family | HOX-related factors{3.1.1} | ||||||||
TF subfamily | HOX5{3.1.1.5} | ||||||||
MGI | 96177 | ||||||||
EntrezGene | 15402 | ||||||||
UniProt ID | HXA5_MOUSE | ||||||||
UniProt AC | P09021 | ||||||||
Comment | |||||||||
Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
Standard thresholds |
|
A | C | G | T | |
---|---|---|---|---|
01 | 4.653 | 16.891 | 2.973 | 27.769 |
02 | 0.0 | 13.481 | 0.895 | 37.91 |
03 | 15.375 | 8.853 | 24.961 | 3.097 |
04 | 52.286 | 0.0 | 0.0 | 0.0 |
05 | 0.0 | 0.0 | 0.497 | 51.788 |
06 | 0.0 | 0.0 | 0.0 | 52.286 |
07 | 42.662 | 0.0 | 6.264 | 3.36 |
08 | 33.853 | 3.171 | 12.775 | 2.486 |
09 | 3.37 | 8.172 | 0.895 | 39.848 |
10 | 13.059 | 4.151 | 29.632 | 5.444 |
A | C | G | T | |
---|---|---|---|---|
01 | -0.913 | 0.24 | -1.267 | 0.716 |
02 | -2.654 | 0.029 | -2.01 | 1.018 |
03 | 0.152 | -0.357 | 0.613 | -1.236 |
04 | 1.332 | -2.654 | -2.654 | -2.654 |
05 | -2.654 | -2.654 | -2.247 | 1.323 |
06 | -2.654 | -2.654 | -2.654 | 1.332 |
07 | 1.133 | -2.654 | -0.662 | -1.173 |
08 | 0.907 | -1.218 | -0.021 | -1.398 |
09 | -1.171 | -0.428 | -2.01 | 1.066 |
10 | -0.001 | -1.006 | 0.778 | -0.782 |