Model info
Transcription factorTCF12
ModelHTF4_HUMAN.H10MO.B
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
OriginChIP-Seq
Model length11
Quality
B
ConsensusvnSCAGSTGbb
wAUC
0.7923845357850936
Best AUC
0.8030591245829948
Benchmark datasets3
Aligned words504
TF familyE2A-related factors{1.2.1}
TF subfamilyHTF-4 (TCF-12, HEB){1.2.1.0.3}
HGNC11623
EntrezGene6938
UniProt IDHTF4_HUMAN
UniProt ACQ99081
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 4.4901
0.0005 5.5381
0.0001 7.7541
PCM
ACGT
01133.137183.886138.61544.362
02132.71988.533156.963121.785
0369.774246.667182.5620.997
045.965485.9272.8035.306
05493.8060.9253.4891.78
061.1690.0498.8310.0
0725.408114.649350.7029.241
0840.5975.88512.456441.062
090.04.498488.9596.543
1036.281152.42141.467169.833
1176.097104.956213.078105.87
PWM
ACGT
010.0620.3820.102-1.014
020.059-0.340.225-0.026
03-0.5730.6740.375-3.904
04-2.8231.349-3.369-2.915
051.365-3.933-3.223-3.637
06-3.839-4.41.375-4.4
07-1.546-0.0851.024-2.462
08-1.099-2.834-2.2011.252
09-4.4-3.041.355-2.749
10-1.2070.1960.1220.303
11-0.488-0.1720.528-0.164