Model info
| Transcription factor | Hsf1 | ||||||||
| Model | HSF1_MOUSE.H10MO.A | ||||||||
| Model type | Mononucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Origin | HOCOMOCO v9 | ||||||||
| Model length | 14 | ||||||||
| Quality | A | ||||||||
| Consensus | vGAAnnWWSbRGMR | ||||||||
| wAUC | |||||||||
| Best AUC | |||||||||
| Benchmark datasets | |||||||||
| Aligned words | 2083 | ||||||||
| TF family | HSF factors{3.4.1} | ||||||||
| TF subfamily | HSF1 (HSTF1){3.4.1.0.1} | ||||||||
| MGI | 96238 | ||||||||
| EntrezGene | 15499 | ||||||||
| UniProt ID | HSF1_MOUSE | ||||||||
| UniProt AC | P38532 | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
|
PCM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 900.285 | 246.888 | 721.18 | 212.648 |
| 02 | 146.019 | 67.732 | 1805.032 | 62.217 |
| 03 | 1751.574 | 99.78 | 71.505 | 158.141 |
| 04 | 1697.853 | 157.117 | 144.145 | 81.885 |
| 05 | 609.428 | 445.706 | 529.763 | 496.103 |
| 06 | 594.177 | 479.687 | 707.486 | 299.649 |
| 07 | 290.534 | 202.805 | 255.713 | 1331.948 |
| 08 | 282.037 | 221.853 | 223.904 | 1353.206 |
| 09 | 162.869 | 1619.226 | 222.784 | 76.121 |
| 10 | 208.68 | 669.666 | 352.983 | 849.671 |
| 11 | 1286.169 | 188.638 | 504.931 | 101.262 |
| 12 | 118.215 | 68.438 | 1846.655 | 47.692 |
| 13 | 1544.241 | 224.015 | 186.98 | 125.763 |
| 14 | 1566.508 | 99.651 | 292.099 | 122.742 |
PWM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 0.547 | -0.741 | 0.326 | -0.889 |
| 02 | -1.261 | -2.015 | 1.241 | -2.097 |
| 03 | 1.211 | -1.636 | -1.962 | -1.182 |
| 04 | 1.18 | -1.189 | -1.274 | -1.83 |
| 05 | 0.158 | -0.154 | 0.018 | -0.047 |
| 06 | 0.132 | -0.081 | 0.306 | -0.549 |
| 07 | -0.58 | -0.936 | -0.706 | 0.938 |
| 08 | -0.609 | -0.847 | -0.838 | 0.954 |
| 09 | -1.153 | 1.133 | -0.843 | -1.901 |
| 10 | -0.908 | 0.252 | -0.386 | 0.489 |
| 11 | 0.903 | -1.008 | -0.03 | -1.622 |
| 12 | -1.469 | -2.005 | 1.264 | -2.354 |
| 13 | 1.086 | -0.838 | -1.017 | -1.408 |
| 14 | 1.1 | -1.637 | -0.574 | -1.432 |