Model info
| Transcription factor | Onecut1 | ||||||||
| Model | HNF6_MOUSE.H10MO.C | ||||||||
| Model type | Mononucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Origin | HOCOMOCO v9 | ||||||||
| Model length | 14 | ||||||||
| Quality | C | ||||||||
| Consensus | dWYATTGATTWhdh | ||||||||
| wAUC | |||||||||
| Best AUC | |||||||||
| Benchmark datasets | |||||||||
| Aligned words | 24 | ||||||||
| TF family | HD-CUT factors{3.1.9} | ||||||||
| TF subfamily | ONECUT{3.1.9.1} | ||||||||
| MGI | 1196423 | ||||||||
| EntrezGene | 15379 | ||||||||
| UniProt ID | HNF6_MOUSE | ||||||||
| UniProt AC | O08755 | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
|
PCM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 7.657 | 1.943 | 4.343 | 10.057 |
| 02 | 7.429 | 3.771 | 0.0 | 12.8 |
| 03 | 2.171 | 3.771 | 1.029 | 17.029 |
| 04 | 24.0 | 0.0 | 0.0 | 0.0 |
| 05 | 0.0 | 0.0 | 0.0 | 24.0 |
| 06 | 0.0 | 1.143 | 3.086 | 19.771 |
| 07 | 0.0 | 0.0 | 24.0 | 0.0 |
| 08 | 22.971 | 0.0 | 1.029 | 0.0 |
| 09 | 0.0 | 7.086 | 0.0 | 16.914 |
| 10 | 1.943 | 1.143 | 2.171 | 18.743 |
| 11 | 4.914 | 2.743 | 0.0 | 16.343 |
| 12 | 7.543 | 3.086 | 1.829 | 11.543 |
| 13 | 5.943 | 2.171 | 6.743 | 9.143 |
| 14 | 7.343 | 4.943 | 3.114 | 8.6 |
PWM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 0.218 | -0.909 | -0.28 | 0.468 |
| 02 | 0.191 | -0.397 | -2.146 | 0.694 |
| 03 | -0.829 | -0.397 | -1.316 | 0.964 |
| 04 | 1.295 | -2.146 | -2.146 | -2.146 |
| 05 | -2.146 | -2.146 | -2.146 | 1.295 |
| 06 | -2.146 | -1.255 | -0.56 | 1.108 |
| 07 | -2.146 | -2.146 | 1.295 | -2.146 |
| 08 | 1.252 | -2.146 | -1.316 | -2.146 |
| 09 | -2.146 | 0.148 | -2.146 | 0.958 |
| 10 | -0.909 | -1.255 | -0.829 | 1.056 |
| 11 | -0.174 | -0.653 | -2.146 | 0.925 |
| 12 | 0.205 | -0.56 | -0.952 | 0.597 |
| 13 | -0.008 | -0.829 | 0.104 | 0.38 |
| 14 | 0.18 | -0.169 | -0.553 | 0.324 |