Transcription factor | ONECUT1 | ||||||||
Model | HNF6_HUMAN.H10MO.C | ||||||||
Model type | Mononucleotide PWM | ||||||||
LOGO | |||||||||
LOGO (reverse complement) | |||||||||
Origin | HOCOMOCO v9 | ||||||||
Model length | 14 | ||||||||
Quality | C | ||||||||
Consensus | dWYATTGATTWhdh | ||||||||
wAUC | |||||||||
Best AUC | |||||||||
Benchmark datasets | |||||||||
Aligned words | 24 | ||||||||
TF family | HD-CUT factors{3.1.9} | ||||||||
TF subfamily | ONECUT{3.1.9.1} | ||||||||
HGNC | 8138 | ||||||||
EntrezGene | 3175 | ||||||||
UniProt ID | HNF6_HUMAN | ||||||||
UniProt AC | Q9UBC0 | ||||||||
Comment | |||||||||
Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
Standard thresholds |
|
A | C | G | T | |
---|---|---|---|---|
01 | 7.657 | 1.943 | 4.343 | 10.057 |
02 | 7.429 | 3.771 | 0.0 | 12.8 |
03 | 2.171 | 3.771 | 1.029 | 17.029 |
04 | 24.0 | 0.0 | 0.0 | 0.0 |
05 | 0.0 | 0.0 | 0.0 | 24.0 |
06 | 0.0 | 1.143 | 3.086 | 19.771 |
07 | 0.0 | 0.0 | 24.0 | 0.0 |
08 | 22.971 | 0.0 | 1.029 | 0.0 |
09 | 0.0 | 7.086 | 0.0 | 16.914 |
10 | 1.943 | 1.143 | 2.171 | 18.743 |
11 | 4.914 | 2.743 | 0.0 | 16.343 |
12 | 7.543 | 3.086 | 1.829 | 11.543 |
13 | 5.943 | 2.171 | 6.743 | 9.143 |
14 | 7.343 | 4.943 | 3.114 | 8.6 |
A | C | G | T | |
---|---|---|---|---|
01 | 0.218 | -0.909 | -0.28 | 0.468 |
02 | 0.191 | -0.397 | -2.146 | 0.694 |
03 | -0.829 | -0.397 | -1.316 | 0.964 |
04 | 1.295 | -2.146 | -2.146 | -2.146 |
05 | -2.146 | -2.146 | -2.146 | 1.295 |
06 | -2.146 | -1.255 | -0.56 | 1.108 |
07 | -2.146 | -2.146 | 1.295 | -2.146 |
08 | 1.252 | -2.146 | -1.316 | -2.146 |
09 | -2.146 | 0.148 | -2.146 | 0.958 |
10 | -0.909 | -1.255 | -0.829 | 1.056 |
11 | -0.174 | -0.653 | -2.146 | 0.925 |
12 | 0.205 | -0.56 | -0.952 | 0.597 |
13 | -0.008 | -0.829 | 0.104 | 0.38 |
14 | 0.18 | -0.169 | -0.553 | 0.324 |