Model info
| Transcription factor | Hnf4g | ||||||||
| Model | HNF4G_MOUSE.H10MO.C | ||||||||
| Model type | Mononucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Origin | HOCOMOCO v9 | ||||||||
| Model length | 12 | ||||||||
| Quality | C | ||||||||
| Consensus | SGSCAMAGYMCA | ||||||||
| wAUC | |||||||||
| Best AUC | |||||||||
| Benchmark datasets | |||||||||
| Aligned words | 7 | ||||||||
| TF family | RXR-related receptors (NR2){2.1.3} | ||||||||
| TF subfamily | HNF-4 (NR2A){2.1.3.2} | ||||||||
| MGI | 1353604 | ||||||||
| EntrezGene | 30942 | ||||||||
| UniProt ID | HNF4G_MOUSE | ||||||||
| UniProt AC | Q9WUU6 | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
|
PCM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 0.24 | 1.613 | 4.907 | 0.24 |
| 02 | 0.0 | 0.0 | 5.078 | 1.922 |
| 03 | 1.098 | 3.569 | 1.99 | 0.343 |
| 04 | 0.0 | 7.0 | 0.0 | 0.0 |
| 05 | 5.147 | 1.373 | 0.0 | 0.48 |
| 06 | 4.529 | 1.373 | 1.098 | 0.0 |
| 07 | 6.52 | 0.0 | 0.48 | 0.0 |
| 08 | 0.0 | 0.0 | 7.0 | 0.0 |
| 09 | 0.0 | 1.373 | 0.824 | 4.804 |
| 10 | 1.373 | 4.461 | 0.0 | 1.167 |
| 11 | 0.0 | 7.0 | 0.0 | 0.0 |
| 12 | 7.0 | 0.0 | 0.0 | 0.0 |
PWM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | -1.124 | -0.063 | 0.88 | -1.124 |
| 02 | -1.525 | -1.525 | 0.912 | 0.074 |
| 03 | -0.345 | 0.595 | 0.102 | -0.992 |
| 04 | -1.525 | 1.208 | -1.525 | -1.525 |
| 05 | 0.924 | -0.185 | -1.525 | -0.839 |
| 06 | 0.808 | -0.185 | -0.345 | -1.525 |
| 07 | 1.142 | -1.525 | -0.839 | -1.525 |
| 08 | -1.525 | -1.525 | 1.208 | -1.525 |
| 09 | -1.525 | -0.185 | -0.535 | 0.861 |
| 10 | -0.185 | 0.794 | -1.525 | -0.302 |
| 11 | -1.525 | 1.208 | -1.525 | -1.525 |
| 12 | 1.208 | -1.525 | -1.525 | -1.525 |