Model info
Transcription factorHNF4G
ModelHNF4G_HUMAN.H10MO.C
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
OriginChIP-Seq
Model length14
Quality
C
ConsensusvdKdnCAAAGKbCR
wAUC
0.8944098206406537
Best AUC
0.8944098206406538
Benchmark datasets1
Aligned words500
TF familyRXR-related receptors (NR2){2.1.3}
TF subfamilyHNF-4 (NR2A){2.1.3.2}
HGNC5026
EntrezGene3174
UniProt IDHNF4G_HUMAN
UniProt ACQ14541
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 4.1061
0.0005 5.1051
0.0001 7.1481
PCM
ACGT
01153.203100.62194.23751.939
02229.9821.474186.93261.614
0348.28416.427386.17849.11
0486.38242.75177.035193.832
0579.761154.421123.748142.07
065.795437.70813.64442.853
07475.60211.42111.9421.035
08442.7021.91453.641.744
09455.9923.07335.4035.532
101.8184.433489.1574.592
117.6534.769219.617267.961
1211.974216.12878.497193.4
1310.478421.15918.36350.0
14339.90340.54764.31255.238
PWM
ACGT
010.201-0.2140.436-0.861
020.604-1.7040.398-0.695
03-0.932-1.9511.12-0.915
04-0.364-1.050.3440.434
05-0.4420.209-0.010.127
06-2.8461.244-2.12-1.047
071.327-2.278-2.238-3.889
081.256-3.597-0.83-3.647
091.285-3.309-1.231-2.883
10-3.625-3.0511.355-3.025
11-2.621-2.9970.5580.756
12-2.2360.542-0.4580.432
13-2.3531.206-1.849-0.898
140.993-1.101-0.653-0.801