Model info
| Transcription factor | Hnf1b | ||||||||
| Model | HNF1B_MOUSE.H10MO.B | ||||||||
| Model type | Mononucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Origin | HOCOMOCO v9 | ||||||||
| Model length | 14 | ||||||||
| Quality | B | ||||||||
| Consensus | dRTTAATRdTTdAY | ||||||||
| wAUC | |||||||||
| Best AUC | |||||||||
| Benchmark datasets | |||||||||
| Aligned words | 58 | ||||||||
| TF family | POU domain factors{3.1.10} | ||||||||
| TF subfamily | HNF1-like factors{3.1.10.7} | ||||||||
| MGI | 98505 | ||||||||
| EntrezGene | 21410 | ||||||||
| UniProt ID | HNF1B_MOUSE | ||||||||
| UniProt AC | P27889 | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
|
PCM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 16.696 | 3.399 | 29.031 | 7.875 |
| 02 | 9.284 | 2.354 | 36.375 | 8.986 |
| 03 | 0.796 | 11.871 | 0.497 | 43.836 |
| 04 | 0.0 | 10.014 | 0.995 | 45.991 |
| 05 | 52.855 | 0.497 | 0.796 | 2.852 |
| 06 | 45.428 | 2.686 | 8.389 | 0.497 |
| 07 | 7.9 | 0.373 | 1.865 | 46.862 |
| 08 | 23.493 | 2.288 | 30.722 | 0.497 |
| 09 | 28.011 | 3.208 | 9.243 | 16.538 |
| 10 | 8.621 | 0.0 | 3.846 | 44.532 |
| 11 | 2.835 | 6.466 | 0.746 | 46.953 |
| 12 | 32.33 | 6.168 | 8.323 | 10.18 |
| 13 | 45.262 | 2.189 | 2.089 | 7.461 |
| 14 | 6.516 | 38.879 | 4.526 | 7.079 |
PWM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 0.149 | -1.242 | 0.677 | -0.541 |
| 02 | -0.394 | -1.512 | 0.896 | -0.423 |
| 03 | -2.134 | -0.169 | -2.314 | 1.078 |
| 04 | -2.715 | -0.325 | -2.029 | 1.125 |
| 05 | 1.261 | -2.314 | -2.134 | -1.374 |
| 06 | 1.113 | -1.418 | -0.485 | -2.314 |
| 07 | -0.538 | -2.4 | -1.669 | 1.143 |
| 08 | 0.474 | -1.532 | 0.732 | -2.314 |
| 09 | 0.643 | -1.286 | -0.398 | 0.14 |
| 10 | -0.46 | -2.715 | -1.145 | 1.093 |
| 11 | -1.378 | -0.713 | -2.162 | 1.145 |
| 12 | 0.781 | -0.754 | -0.492 | -0.31 |
| 13 | 1.109 | -1.562 | -1.594 | -0.589 |
| 14 | -0.707 | 0.961 | -1.014 | -0.635 |