Model info
| Transcription factor | EN2 | ||||||||
| Model | HME2_HUMAN.H10MO.D | ||||||||
| Model type | Mononucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Origin | HT-SELEX | ||||||||
| Model length | 11 | ||||||||
| Quality | D | ||||||||
| Consensus | nnbRRTTRvnn | ||||||||
| wAUC | |||||||||
| Best AUC | |||||||||
| Benchmark datasets | |||||||||
| Aligned words | 9521 | ||||||||
| TF family | NK-related factors{3.1.2} | ||||||||
| TF subfamily | EN (Engrailed-like factors){3.1.2.7} | ||||||||
| HGNC | 3343 | ||||||||
| EntrezGene | 2020 | ||||||||
| UniProt ID | HME2_HUMAN | ||||||||
| UniProt AC | P19622 | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
|
PCM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 2325.487 | 1997.408 | 3118.256 | 2076.85 |
| 02 | 2122.016 | 2020.882 | 3433.301 | 1941.801 |
| 03 | 1426.783 | 1454.494 | 1781.563 | 4855.16 |
| 04 | 4979.274 | 277.108 | 2902.003 | 1359.616 |
| 05 | 5966.977 | 534.769 | 3015.2 | 1.054 |
| 06 | 1.205 | 1.205 | 227.089 | 9288.502 |
| 07 | 1.054 | 1.054 | 2920.66 | 6595.232 |
| 08 | 5624.644 | 507.665 | 2037.686 | 1348.005 |
| 09 | 2487.157 | 1344.996 | 4467.826 | 1218.021 |
| 10 | 1535.473 | 2725.693 | 3055.268 | 2201.566 |
| 11 | 1688.195 | 2079.304 | 3647.082 | 2103.419 |
PWM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | -0.023 | -0.175 | 0.27 | -0.136 |
| 02 | -0.114 | -0.163 | 0.366 | -0.203 |
| 03 | -0.511 | -0.492 | -0.289 | 0.713 |
| 04 | 0.738 | -2.143 | 0.198 | -0.559 |
| 05 | 0.919 | -1.489 | 0.237 | -6.568 |
| 06 | -6.524 | -6.524 | -2.34 | 1.361 |
| 07 | -6.568 | -6.568 | 0.205 | 1.019 |
| 08 | 0.86 | -1.541 | -0.155 | -0.568 |
| 09 | 0.044 | -0.57 | 0.63 | -0.669 |
| 10 | -0.438 | 0.136 | 0.25 | -0.078 |
| 11 | -0.343 | -0.135 | 0.427 | -0.123 |