Model info
| Transcription factor | EN1 | ||||||||
| Model | HME1_HUMAN.H10MO.D | ||||||||
| Model type | Mononucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Origin | HT-SELEX | ||||||||
| Model length | 17 | ||||||||
| Quality | D | ||||||||
| Consensus | vbTAATTAvbhhWWWWd | ||||||||
| wAUC | |||||||||
| Best AUC | |||||||||
| Benchmark datasets | |||||||||
| Aligned words | 817 | ||||||||
| TF family | NK-related factors{3.1.2} | ||||||||
| TF subfamily | EN (Engrailed-like factors){3.1.2.7} | ||||||||
| HGNC | 3342 | ||||||||
| EntrezGene | 2019 | ||||||||
| UniProt ID | HME1_HUMAN | ||||||||
| UniProt AC | Q05925 | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
|
PCM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 248.25 | 202.25 | 268.25 | 97.25 |
| 02 | 80.0 | 456.0 | 83.0 | 197.0 |
| 03 | 1.25 | 23.25 | 2.25 | 789.25 |
| 04 | 808.0 | 2.0 | 6.0 | 0.0 |
| 05 | 814.0 | 1.0 | 1.0 | 0.0 |
| 06 | 0.0 | 0.0 | 0.0 | 816.0 |
| 07 | 0.0 | 11.0 | 15.0 | 790.0 |
| 08 | 453.0 | 0.0 | 363.0 | 0.0 |
| 09 | 101.0 | 338.0 | 320.0 | 57.0 |
| 10 | 77.0 | 378.0 | 118.0 | 243.0 |
| 11 | 184.0 | 345.0 | 107.0 | 180.0 |
| 12 | 418.0 | 198.0 | 58.0 | 142.0 |
| 13 | 395.0 | 86.0 | 28.0 | 307.0 |
| 14 | 257.75 | 43.75 | 9.75 | 504.75 |
| 15 | 380.25 | 42.25 | 8.25 | 385.25 |
| 16 | 444.25 | 14.25 | 46.25 | 311.25 |
| 17 | 279.75 | 77.75 | 107.75 | 350.75 |
PWM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 0.195 | -0.009 | 0.272 | -0.732 |
| 02 | -0.924 | 0.8 | -0.887 | -0.035 |
| 03 | -4.253 | -2.11 | -3.959 | 1.347 |
| 04 | 1.37 | -4.024 | -3.288 | -4.81 |
| 05 | 1.378 | -4.342 | -4.342 | -4.81 |
| 06 | -4.81 | -4.81 | -4.81 | 1.38 |
| 07 | -4.81 | -2.787 | -2.512 | 1.348 |
| 08 | 0.793 | -4.81 | 0.573 | -4.81 |
| 09 | -0.695 | 0.502 | 0.447 | -1.254 |
| 10 | -0.961 | 0.613 | -0.542 | 0.174 |
| 11 | -0.102 | 0.522 | -0.638 | -0.124 |
| 12 | 0.713 | -0.03 | -1.237 | -0.359 |
| 13 | 0.657 | -0.853 | -1.936 | 0.406 |
| 14 | 0.232 | -1.51 | -2.89 | 0.901 |
| 15 | 0.619 | -1.544 | -3.031 | 0.632 |
| 16 | 0.774 | -2.558 | -1.457 | 0.42 |
| 17 | 0.314 | -0.951 | -0.631 | 0.539 |