Model info
Transcription factorHlf
ModelHLF_MOUSE.H10MO.C
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
OriginHOCOMOCO v9
Model length13
Quality
C
ConsensusnRTKRYGTAAYvn
wAUC
Best AUC
Benchmark datasets
Aligned words35
TF familyC/EBP-related{1.1.8}
TF subfamilyPAR factors{1.1.8.2}
MGI96108
EntrezGene217082
UniProt IDHLF_MOUSE
UniProt ACQ8BW74
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 4.6571
0.0005 5.5031
0.0001 7.2571
PCM
ACGT
017.0825.70315.0867.082
0218.8562.9910.1172.99
030.00.00.034.953
040.6442.0236.0726.215
0518.7652.02314.1640.0
060.016.1882.66816.097
072.0230.032.930.0
080.06.070.028.883
0934.9530.00.00.0
1033.9870.00.00.966
110.96619.8220.014.164
1214.16413.7524.0472.99
134.28913.02713.3494.289
PWM
ACGT
01-0.189-0.3790.506-0.189
020.718-0.9090.134-0.909
03-2.383-2.383-2.3831.315
04-1.837-1.196-0.3251.035
050.714-1.1960.447-2.383
06-2.3830.573-0.9960.568
07-1.196-2.3831.256-2.383
08-2.383-0.325-2.3831.129
091.315-2.383-2.383-2.383
101.287-2.383-2.383-1.647
11-1.6470.766-2.3830.447
120.4470.419-0.668-0.909
13-0.620.3680.391-0.62