Model info
| Transcription factor | Hlf | ||||||||
| Model | HLF_MOUSE.H10MO.C | ||||||||
| Model type | Mononucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Origin | HOCOMOCO v9 | ||||||||
| Model length | 13 | ||||||||
| Quality | C | ||||||||
| Consensus | nRTKRYGTAAYvn | ||||||||
| wAUC | |||||||||
| Best AUC | |||||||||
| Benchmark datasets | |||||||||
| Aligned words | 35 | ||||||||
| TF family | C/EBP-related{1.1.8} | ||||||||
| TF subfamily | PAR factors{1.1.8.2} | ||||||||
| MGI | 96108 | ||||||||
| EntrezGene | 217082 | ||||||||
| UniProt ID | HLF_MOUSE | ||||||||
| UniProt AC | Q8BW74 | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
|
PCM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 7.082 | 5.703 | 15.086 | 7.082 |
| 02 | 18.856 | 2.99 | 10.117 | 2.99 |
| 03 | 0.0 | 0.0 | 0.0 | 34.953 |
| 04 | 0.644 | 2.023 | 6.07 | 26.215 |
| 05 | 18.765 | 2.023 | 14.164 | 0.0 |
| 06 | 0.0 | 16.188 | 2.668 | 16.097 |
| 07 | 2.023 | 0.0 | 32.93 | 0.0 |
| 08 | 0.0 | 6.07 | 0.0 | 28.883 |
| 09 | 34.953 | 0.0 | 0.0 | 0.0 |
| 10 | 33.987 | 0.0 | 0.0 | 0.966 |
| 11 | 0.966 | 19.822 | 0.0 | 14.164 |
| 12 | 14.164 | 13.752 | 4.047 | 2.99 |
| 13 | 4.289 | 13.027 | 13.349 | 4.289 |
PWM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | -0.189 | -0.379 | 0.506 | -0.189 |
| 02 | 0.718 | -0.909 | 0.134 | -0.909 |
| 03 | -2.383 | -2.383 | -2.383 | 1.315 |
| 04 | -1.837 | -1.196 | -0.325 | 1.035 |
| 05 | 0.714 | -1.196 | 0.447 | -2.383 |
| 06 | -2.383 | 0.573 | -0.996 | 0.568 |
| 07 | -1.196 | -2.383 | 1.256 | -2.383 |
| 08 | -2.383 | -0.325 | -2.383 | 1.129 |
| 09 | 1.315 | -2.383 | -2.383 | -2.383 |
| 10 | 1.287 | -2.383 | -2.383 | -1.647 |
| 11 | -1.647 | 0.766 | -2.383 | 0.447 |
| 12 | 0.447 | 0.419 | -0.668 | -0.909 |
| 13 | -0.62 | 0.368 | 0.391 | -0.62 |