Model info
Transcription factorHif1a
ModelHIF1A_MOUSE.H10MO.A
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
OriginHOCOMOCO v9
Model length12
Quality
A
ConsensusvbvbACGTGMvb
wAUC
Best AUC
Benchmark datasets
Aligned words501
TF familyPAS domain factors{1.2.5}
TF subfamilyAhr-like factors{1.2.5.1}
MGI106918
EntrezGene15251
UniProt IDHIF1A_MOUSE
UniProt ACQ61221
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 4.3681
0.0005 5.6941
0.0001 7.6161
PCM
ACGT
0149.351150.768253.09545.703
0255.397177.526173.39592.599
0367.553181.65232.70317.011
0437.03399.209107.467255.209
05423.9840.51572.8751.544
060.0498.4020.00.515
070.01.029497.3730.515
080.00.00.0498.917
090.00.0498.9170.0
10103.89294.76251.77248.494
1167.981131.679232.34466.914
1231.223153.949195.212118.534
PWM
ACGT
01-0.9090.1870.701-0.983
02-0.7960.3490.326-0.294
03-0.6030.3720.618-1.917
04-1.186-0.226-0.1470.71
051.215-4.112-0.529-3.708
06-4.3981.376-4.398-4.112
07-4.398-3.891.374-4.112
08-4.398-4.398-4.3981.377
09-4.398-4.3981.377-4.398
10-0.180.853-0.862-0.926
11-0.5970.0540.616-0.612
12-1.3490.2080.443-0.05