Model info
| Transcription factor | HES7 | ||||||||
| Model | HES7_HUMAN.H10MO.D | ||||||||
| Model type | Mononucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Origin | HT-SELEX | ||||||||
| Model length | 12 | ||||||||
| Quality | D | ||||||||
| Consensus | WGGCACGTGCCd | ||||||||
| wAUC | |||||||||
| Best AUC | |||||||||
| Benchmark datasets | |||||||||
| Aligned words | 379 | ||||||||
| TF family | Hairy-related factors{1.2.4} | ||||||||
| TF subfamily | Hairy-like factors{1.2.4.1} | ||||||||
| HGNC | 15977 | ||||||||
| EntrezGene | 84667 | ||||||||
| UniProt ID | HES7_HUMAN | ||||||||
| UniProt AC | Q9BYE0 | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
|
PCM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 50.25 | 47.25 | 22.25 | 200.25 |
| 02 | 1.75 | 0.75 | 313.75 | 3.75 |
| 03 | 32.5 | 3.5 | 283.5 | 0.5 |
| 04 | 0.25 | 317.25 | 1.25 | 1.25 |
| 05 | 318.25 | 1.25 | 0.25 | 0.25 |
| 06 | 1.0 | 319.0 | 0.0 | 0.0 |
| 07 | 0.0 | 1.0 | 319.0 | 0.0 |
| 08 | 0.0 | 0.0 | 0.0 | 320.0 |
| 09 | 1.0 | 2.0 | 317.0 | 0.0 |
| 10 | 1.25 | 310.25 | 1.25 | 7.25 |
| 11 | 1.5 | 316.5 | 0.5 | 1.5 |
| 12 | 67.5 | 31.5 | 184.5 | 36.5 |
PWM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | -0.455 | -0.514 | -1.235 | 0.907 |
| 02 | -3.239 | -3.615 | 1.353 | -2.753 |
| 03 | -0.875 | -2.802 | 1.252 | -3.736 |
| 04 | -3.874 | 1.364 | -3.41 | -3.41 |
| 05 | 1.367 | -3.41 | -3.874 | -3.874 |
| 06 | -3.507 | 1.37 | -4.034 | -4.034 |
| 07 | -4.034 | -3.507 | 1.37 | -4.034 |
| 08 | -4.034 | -4.034 | -4.034 | 1.373 |
| 09 | -3.507 | -3.164 | 1.364 | -4.034 |
| 10 | -3.41 | 1.342 | -3.41 | -2.237 |
| 11 | -3.321 | 1.362 | -3.736 | -3.321 |
| 12 | -0.167 | -0.905 | 0.826 | -0.764 |