Transcription factor | NHLH1 | ||||||||
Model | HEN1_HUMAN.H10MO.C | ||||||||
Model type | Mononucleotide PWM | ||||||||
LOGO | |||||||||
LOGO (reverse complement) | |||||||||
Origin | HOCOMOCO v9 | ||||||||
Model length | 20 | ||||||||
Quality | C | ||||||||
Consensus | bKGGnMbCAGCTGCGKCYhh | ||||||||
wAUC | |||||||||
Best AUC | |||||||||
Benchmark datasets | |||||||||
Aligned words | 55 | ||||||||
TF family | Tal-related factors{1.2.3} | ||||||||
TF subfamily | Tal / HEN-like factors{1.2.3.1} | ||||||||
HGNC | 7817 | ||||||||
EntrezGene | 4807 | ||||||||
UniProt ID | HEN1_HUMAN | ||||||||
UniProt AC | Q02575 | ||||||||
Comment | |||||||||
Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
Standard thresholds |
|
A | C | G | T | |
---|---|---|---|---|
01 | 6.586 | 12.665 | 16.138 | 19.611 |
02 | 6.078 | 5.21 | 35.029 | 8.683 |
03 | 1.737 | 1.737 | 42.843 | 8.683 |
04 | 5.21 | 0.0 | 47.185 | 2.605 |
05 | 6.947 | 6.947 | 25.477 | 15.63 |
06 | 27.214 | 25.181 | 2.605 | 0.0 |
07 | 6.947 | 7.815 | 24.313 | 15.925 |
08 | 2.605 | 50.658 | 1.737 | 0.0 |
09 | 53.263 | 0.868 | 0.868 | 0.0 |
10 | 0.0 | 4.342 | 48.053 | 2.605 |
11 | 0.0 | 55.0 | 0.0 | 0.0 |
12 | 3.473 | 0.0 | 0.0 | 51.527 |
13 | 0.0 | 0.0 | 54.132 | 0.868 |
14 | 0.868 | 48.922 | 3.473 | 1.737 |
15 | 2.605 | 0.868 | 45.448 | 6.078 |
16 | 0.0 | 12.157 | 15.63 | 27.214 |
17 | 0.868 | 48.922 | 3.473 | 1.737 |
18 | 5.21 | 38.502 | 4.342 | 6.947 |
19 | 6.078 | 23.445 | 5.21 | 20.267 |
20 | 7.02 | 21.782 | 3.547 | 22.65 |
A | C | G | T | |
---|---|---|---|---|
01 | -0.665 | -0.076 | 0.15 | 0.335 |
02 | -0.734 | -0.865 | 0.893 | -0.421 |
03 | -1.684 | -1.684 | 1.089 | -0.421 |
04 | -0.865 | -2.69 | 1.184 | -1.409 |
05 | -0.618 | -0.618 | 0.585 | 0.12 |
06 | 0.649 | 0.574 | -1.409 | -2.69 |
07 | -0.618 | -0.515 | 0.54 | 0.138 |
08 | -1.409 | 1.253 | -1.684 | -2.69 |
09 | 1.303 | -2.065 | -2.065 | -2.69 |
10 | -2.69 | -1.015 | 1.202 | -1.409 |
11 | -2.69 | 1.334 | -2.69 | -2.69 |
12 | -1.193 | -2.69 | -2.69 | 1.27 |
13 | -2.69 | -2.69 | 1.318 | -2.065 |
14 | -2.065 | 1.219 | -1.193 | -1.684 |
15 | -1.409 | -2.065 | 1.147 | -0.734 |
16 | -2.69 | -0.114 | 0.12 | 0.649 |
17 | -2.065 | 1.219 | -1.193 | -1.684 |
18 | -0.865 | 0.985 | -1.015 | -0.618 |
19 | -0.734 | 0.505 | -0.865 | 0.366 |
20 | -0.609 | 0.435 | -1.176 | 0.472 |