Transcription factor | Hand1 | ||||||||
Model | HAND1_MOUSE.H10MO.D | ||||||||
Model type | Mononucleotide PWM | ||||||||
LOGO | |||||||||
LOGO (reverse complement) | |||||||||
Origin | HOCOMOCO v9 | ||||||||
Model length | 12 | ||||||||
Quality | D | ||||||||
Consensus | dnRTCTGGhWdh | ||||||||
wAUC | |||||||||
Best AUC | |||||||||
Benchmark datasets | |||||||||
Aligned words | 26 | ||||||||
TF family | Tal-related factors{1.2.3} | ||||||||
TF subfamily | Twist-like factors{1.2.3.2} | ||||||||
MGI | 103577 | ||||||||
EntrezGene | 15110 | ||||||||
UniProt ID | HAND1_MOUSE | ||||||||
UniProt AC | Q64279 | ||||||||
Comment | |||||||||
Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
Standard thresholds |
|
A | C | G | T | |
---|---|---|---|---|
01 | 4.5 | 0.5 | 16.5 | 4.5 |
02 | 1.0 | 9.0 | 9.0 | 7.0 |
03 | 10.0 | 0.0 | 15.0 | 1.0 |
04 | 0.0 | 2.0 | 1.0 | 23.0 |
05 | 0.0 | 25.0 | 1.0 | 0.0 |
06 | 0.0 | 0.0 | 0.0 | 26.0 |
07 | 0.0 | 0.0 | 26.0 | 0.0 |
08 | 0.0 | 2.0 | 23.0 | 1.0 |
09 | 9.0 | 11.0 | 1.0 | 5.0 |
10 | 13.0 | 1.0 | 2.0 | 10.0 |
11 | 5.0 | 3.0 | 4.0 | 14.0 |
12 | 4.25 | 5.25 | 3.25 | 13.25 |
A | C | G | T | |
---|---|---|---|---|
01 | -0.319 | -1.716 | 0.862 | -0.319 |
02 | -1.394 | 0.294 | 0.294 | 0.066 |
03 | 0.391 | -2.195 | 0.771 | -1.394 |
04 | -2.195 | -0.955 | -1.394 | 1.18 |
05 | -2.195 | 1.261 | -1.394 | -2.195 |
06 | -2.195 | -2.195 | -2.195 | 1.299 |
07 | -2.195 | -2.195 | 1.299 | -2.195 |
08 | -2.195 | -0.955 | 1.18 | -1.394 |
09 | 0.294 | 0.479 | -1.394 | -0.23 |
10 | 0.636 | -1.394 | -0.955 | 0.391 |
11 | -0.23 | -0.651 | -0.418 | 0.706 |
12 | -0.368 | -0.187 | -0.588 | 0.654 |