Model info
| Transcription factor | GFI1B | ||||||||
| Model | GFI1B_HUMAN.H10MO.C | ||||||||
| Model type | Mononucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Origin | HOCOMOCO v9 | ||||||||
| Model length | 11 | ||||||||
| Quality | C | ||||||||
| Consensus | hKYMSTGATTb | ||||||||
| wAUC | |||||||||
| Best AUC | |||||||||
| Benchmark datasets | |||||||||
| Aligned words | 74 | ||||||||
| TF family | More than 3 adjacent zinc finger factors{2.3.3} | ||||||||
| TF subfamily | GFI1 factors{2.3.3.21} | ||||||||
| HGNC | 4238 | ||||||||
| EntrezGene | 8328 | ||||||||
| UniProt ID | GFI1B_HUMAN | ||||||||
| UniProt AC | Q5VTD9 | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
|
PCM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 23.529 | 9.412 | 5.826 | 35.182 |
| 02 | 8.179 | 2.129 | 54.79 | 8.852 |
| 03 | 7.283 | 47.955 | 6.05 | 12.661 |
| 04 | 39.72 | 19.384 | 2.017 | 12.829 |
| 05 | 1.12 | 21.289 | 47.507 | 4.034 |
| 06 | 3.025 | 1.008 | 2.129 | 67.787 |
| 07 | 0.0 | 0.0 | 73.95 | 0.0 |
| 08 | 72.941 | 1.008 | 0.0 | 0.0 |
| 09 | 2.241 | 1.008 | 0.0 | 70.7 |
| 10 | 1.008 | 0.0 | 0.0 | 72.941 |
| 11 | 7.563 | 13.053 | 14.062 | 39.272 |
PWM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 0.229 | -0.623 | -1.042 | 0.617 |
| 02 | -0.748 | -1.809 | 1.049 | -0.678 |
| 03 | -0.85 | 0.919 | -1.01 | -0.354 |
| 04 | 0.735 | 0.045 | -1.845 | -0.341 |
| 05 | -2.187 | 0.134 | 0.91 | -1.343 |
| 06 | -1.562 | -2.239 | -1.809 | 1.258 |
| 07 | -2.901 | -2.901 | 1.344 | -2.901 |
| 08 | 1.331 | -2.239 | -2.901 | -2.901 |
| 09 | -1.775 | -2.239 | -2.901 | 1.3 |
| 10 | -2.239 | -2.901 | -2.901 | 1.331 |
| 11 | -0.817 | -0.325 | -0.256 | 0.724 |