Model info
Transcription factorNR3C1
ModelGCR_HUMAN.H10MO.S
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
OriginHOCOMOCO v9
Model length7
Quality
S
ConsensusRGRACAd
wAUC
0.6891952268076936
Best AUC
0.7483470197653757
Benchmark datasets15
Aligned words4629
TF familySteroid hormone receptors (NR3){2.1.1}
TF subfamilyGR-like receptors (NR3C){2.1.1.1}
HGNC7978
EntrezGene2908
UniProt IDGCR_HUMAN
UniProt ACP04150
CommentSecondary motif.
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 5.1243
0.0005 5.987
0.0001 7.3581
PCM
ACGT
012883.288.3891252.27482.052
02122.46211.9674054.40737.159
033013.53160.309783.787268.369
043942.05525.516177.45580.969
05124.4753567.225525.6088.687
063932.47445.943198.8648.717
07692.157333.182082.0881118.57
PWM
ACGT
011.003-4.6160.17-2.532
02-2.14-4.3221.343-3.295
031.047-1.875-0.298-1.365
041.315-3.647-1.774-2.545
05-2.1241.215-0.696-4.588
061.313-3.093-1.662-3.037
07-0.422-1.150.6770.057