Model info
Transcription factorGATA6
ModelGATA6_HUMAN.H10DI.B
Model typeDinucleotide PWM
LOGO
LOGO (reverse complement)
OriginChIP-Seq
Model length23
Quality
B
ConsensusnhnnnnndvAGATAASRdddnnn
wAUC
0.8651916892793304
Best AUC
0.9256764943692258
Benchmark datasets2
Aligned words501
TF familyGATA-type zinc fingers{2.2.1}
TF subfamilyTwo zinc-finger GATA factors{2.2.1.1}
HGNC4174
EntrezGene2627
UniProt IDGATA6_HUMAN
UniProt ACQ92908
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 4.4061
0.0005 7.0541
0.0001 13.1441
PCM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
0151.6889.89340.10435.29952.64628.1790.033.4930.21326.2899.66915.58152.03627.724.53962.673
0261.84125.30954.13245.30244.83713.0980.9733.15527.30315.29320.73710.97935.27126.6625.99259.119
0362.42526.47638.77141.58138.80919.2130.88521.45329.38929.05223.04520.34541.76823.59729.71753.475
0456.16715.04360.9940.19146.65211.3913.33636.9629.22415.7724.93222.49148.68929.71420.737.751
0546.46321.98482.42729.85727.9159.7524.03730.21438.3429.52333.1758.91930.74118.71243.10144.839
0633.97412.87650.73345.87638.16111.5471.86228.40164.5928.53545.64523.9724.61811.72824.95252.531
0743.6997.89845.21964.52830.9599.8782.92420.92547.6759.68638.00627.82431.66317.68357.47743.955
0849.36659.66736.9278.03517.40415.0411.96810.73233.57755.57841.03513.43743.59345.00742.91425.718
09129.6032.0550.012.28391.8460.00.083.44799.1590.870.022.81544.5040.01.1312.29
100.00.935364.1750.00.00.02.9250.00.00.01.130.00.00.0130.8350.0
110.00.00.00.00.9350.00.00.0499.0650.00.00.00.00.00.00.0
120.00.9881.837497.1750.00.00.00.00.00.00.00.00.00.00.00.0
130.00.00.00.00.9880.00.00.01.8370.00.00.0491.9130.00.05.262
14488.5961.9052.3731.8640.00.00.00.00.00.00.00.05.2620.00.00.0
1560.60972.642354.875.7360.01.0410.8640.01.1720.01.2010.00.00.01.8640.0
1623.2266.62731.9280.053.54313.8321.9134.395214.63133.46799.97210.733.7751.0150.9470.0
1777.32822.53147.752147.56427.5115.0540.022.37562.95817.7532.5821.4715.9630.8962.8535.413
1889.1868.70449.88825.98125.5313.5841.8615.25734.4816.26915.35817.079108.6112.00735.30740.899
19105.641.61961.80748.78216.4518.5892.91112.61245.3515.32130.73711.00538.16216.49725.4919.066
2061.74239.60870.84433.36944.30712.710.025.0135.98524.09838.95321.9122.78622.8824.86720.933
2138.19316.19257.16753.26752.5959.1433.00834.54961.13721.84629.01922.66120.47417.15935.1528.438
2264.60816.85450.38240.55722.87219.4340.022.03443.00717.03325.54938.75534.72625.43629.79648.956
PWM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
010.498-1.1240.2470.120.517-0.102-4.40.068-0.033-0.171-1.146-0.6840.505-0.119-0.2380.69
020.676-0.2080.5440.3680.357-0.853-3.1480.058-0.133-0.702-0.404-1.0240.12-0.157-0.1820.632
030.686-0.1640.2130.2830.214-0.479-3.213-0.371-0.061-0.072-0.3-0.4230.287-0.277-0.050.532
040.581-0.7180.6630.2490.397-0.988-2.140.166-0.066-0.672-0.223-0.3240.439-0.05-0.4060.187
050.393-0.3470.962-0.045-0.111-1.138-1.967-0.0330.202-0.0560.059-1.224-0.016-0.5050.3180.357
060.083-0.8690.480.380.198-0.975-2.643-0.0940.72-0.090.375-0.261-0.235-0.96-0.2220.514
070.332-1.340.3660.719-0.009-1.126-2.257-0.3950.418-1.1440.194-0.1150.013-0.560.6040.338
080.4530.6410.165-1.323-0.576-0.718-2.597-1.0460.0710.570.269-0.8280.3290.3610.314-0.192
091.413-2.561-4.4-0.9151.07-4.4-4.40.9741.146-3.224-4.4-0.310.35-4.4-3.037-0.914
10-4.4-3.1742.444-4.4-4.4-4.4-2.256-4.4-4.4-4.4-3.037-4.4-4.4-4.41.423-4.4
11-4.4-4.4-4.4-4.4-3.174-4.4-4.4-4.42.759-4.4-4.4-4.4-4.4-4.4-4.4-4.4
12-4.4-3.135-2.6542.755-4.4-4.4-4.4-4.4-4.4-4.4-4.4-4.4-4.4-4.4-4.4-4.4
13-4.4-4.4-4.4-4.4-3.135-4.4-4.4-4.4-2.654-4.4-4.4-4.42.745-4.4-4.4-1.723
142.738-2.624-2.439-2.642-4.4-4.4-4.4-4.4-4.4-4.4-4.4-4.4-1.723-4.4-4.4-4.4
150.6560.8372.418-1.642-4.4-3.097-3.229-4.4-3.009-4.4-2.991-4.4-4.4-4.4-2.642-4.4
16-0.293-1.5060.021-4.40.533-0.8-2.621-1.8891.9160.0681.154-1.046-2.028-3.116-3.165-4.4
170.899-0.3220.421.543-0.126-1.76-4.4-0.3290.694-0.5560.041-0.37-1.606-3.204-2.278-1.696
181.041-1.2470.463-0.182-0.199-2.075-2.644-0.7040.097-0.642-0.698-0.5941.237-0.9370.1210.266
191.2090.2830.6760.441-0.631-1.26-2.26-0.8890.369-0.7-0.016-1.0210.198-0.628-0.201-0.486
200.6750.2340.8120.0650.345-0.882-4.4-0.220.139-0.2560.218-0.35-0.311-0.307-0.225-0.395
210.198-0.6460.5980.5280.516-1.2-2.2320.0990.665-0.353-0.073-0.317-0.416-0.5890.116-0.093
220.72-0.6070.4730.258-0.308-0.468-4.4-0.3440.316-0.597-0.1990.2130.104-0.203-0.0470.444