Model info
Transcription factorGata4
ModelGATA4_MOUSE.H10MO.B
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
OriginHOCOMOCO v9
Model length9
Quality
B
ConsensusdvWGATARv
wAUC
Best AUC
Benchmark datasets
Aligned words107
TF familyGATA-type zinc fingers{2.2.1}
TF subfamilyTwo zinc-finger GATA factors{2.2.1.1}
MGI95664
EntrezGene14463
UniProt IDGATA4_MOUSE
UniProt ACQ08369
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 5.2496
0.0005 5.9816
0.0001 7.1886
PCM
ACGT
0144.35717.2626.50418.878
0217.67942.00335.99411.324
0364.4773.8136.12432.585
041.7330.0105.2670.0
05105.0361.9640.00.0
062.4270.01.56103.013
0798.7380.00.9247.337
0866.6157.51123.119.764
0932.52836.34128.839.302
PWM
ACGT
010.489-0.415-0.009-0.331
02-0.3930.4360.286-0.804
030.855-1.724-1.3420.19
04-2.264-3.1741.338-3.174
051.336-2.187-3.174-3.174
06-2.05-3.174-2.3261.317
071.275-3.174-2.591-1.189
080.887-1.168-0.14-0.938
090.1880.2950.072-0.981