Model info
| Transcription factor | GATA4 | ||||||||
| Model | GATA4_HUMAN.H10MO.B | ||||||||
| Model type | Mononucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Origin | HOCOMOCO v9 | ||||||||
| Model length | 9 | ||||||||
| Quality | B | ||||||||
| Consensus | dvWGATARv | ||||||||
| wAUC | |||||||||
| Best AUC | |||||||||
| Benchmark datasets | |||||||||
| Aligned words | 107 | ||||||||
| TF family | GATA-type zinc fingers{2.2.1} | ||||||||
| TF subfamily | Two zinc-finger GATA factors{2.2.1.1} | ||||||||
| HGNC | 4173 | ||||||||
| EntrezGene | 2626 | ||||||||
| UniProt ID | GATA4_HUMAN | ||||||||
| UniProt AC | P43694 | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
|
PCM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 44.357 | 17.26 | 26.504 | 18.878 |
| 02 | 17.679 | 42.003 | 35.994 | 11.324 |
| 03 | 64.477 | 3.813 | 6.124 | 32.585 |
| 04 | 1.733 | 0.0 | 105.267 | 0.0 |
| 05 | 105.036 | 1.964 | 0.0 | 0.0 |
| 06 | 2.427 | 0.0 | 1.56 | 103.013 |
| 07 | 98.738 | 0.0 | 0.924 | 7.337 |
| 08 | 66.615 | 7.511 | 23.11 | 9.764 |
| 09 | 32.528 | 36.341 | 28.83 | 9.302 |
PWM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 0.489 | -0.415 | -0.009 | -0.331 |
| 02 | -0.393 | 0.436 | 0.286 | -0.804 |
| 03 | 0.855 | -1.724 | -1.342 | 0.19 |
| 04 | -2.264 | -3.174 | 1.338 | -3.174 |
| 05 | 1.336 | -2.187 | -3.174 | -3.174 |
| 06 | -2.05 | -3.174 | -2.326 | 1.317 |
| 07 | 1.275 | -3.174 | -2.591 | -1.189 |
| 08 | 0.887 | -1.168 | -0.14 | -0.938 |
| 09 | 0.188 | 0.295 | 0.072 | -0.981 |