Model info
| Transcription factor | Gata3 | ||||||||
| Model | GATA3_MOUSE.H10MO.C | ||||||||
| Model type | Mononucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Origin | HOCOMOCO v9 | ||||||||
| Model length | 8 | ||||||||
| Quality | C | ||||||||
| Consensus | vWGATARv | ||||||||
| wAUC | 0.7238850047195652 | ||||||||
| Best AUC | 0.7495760198196578 | ||||||||
| Benchmark datasets | 2 | ||||||||
| Aligned words | 89 | ||||||||
| TF family | GATA-type zinc fingers{2.2.1} | ||||||||
| TF subfamily | Two zinc-finger GATA factors{2.2.1.1} | ||||||||
| MGI | 95663 | ||||||||
| EntrezGene | 14462 | ||||||||
| UniProt ID | GATA3_MOUSE | ||||||||
| UniProt AC | P23772 | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
|
PCM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 19.921 | 28.296 | 32.158 | 8.758 |
| 02 | 60.857 | 6.998 | 2.012 | 19.265 |
| 03 | 0.0 | 0.0 | 89.133 | 0.0 |
| 04 | 89.133 | 0.0 | 0.0 | 0.0 |
| 05 | 0.0 | 0.0 | 0.0 | 89.133 |
| 06 | 78.122 | 0.0 | 0.842 | 10.169 |
| 07 | 45.145 | 2.012 | 31.338 | 10.639 |
| 08 | 25.654 | 21.477 | 34.095 | 7.908 |
PWM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | -0.106 | 0.229 | 0.352 | -0.862 |
| 02 | 0.974 | -1.059 | -2.01 | -0.138 |
| 03 | -3.037 | -3.037 | 1.35 | -3.037 |
| 04 | 1.35 | -3.037 | -3.037 | -3.037 |
| 05 | -3.037 | -3.037 | -3.037 | 1.35 |
| 06 | 1.22 | -3.037 | -2.478 | -0.729 |
| 07 | 0.681 | -2.01 | 0.327 | -0.688 |
| 08 | 0.135 | -0.035 | 0.409 | -0.952 |