Model info
| Transcription factor | Foxq1 | ||||||||
| Model | FOXQ1_MOUSE.H10MO.C | ||||||||
| Model type | Mononucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Origin | HOCOMOCO v9 | ||||||||
| Model length | 12 | ||||||||
| Quality | C | ||||||||
| Consensus | nRTTGTTTATKT | ||||||||
| wAUC | |||||||||
| Best AUC | |||||||||
| Benchmark datasets | |||||||||
| Aligned words | 13 | ||||||||
| TF family | Forkhead box (FOX) factors{3.3.1} | ||||||||
| TF subfamily | FOXQ{3.3.1.17} | ||||||||
| MGI | 1298228 | ||||||||
| EntrezGene | 15220 | ||||||||
| UniProt ID | FOXQ1_MOUSE | ||||||||
| UniProt AC | O70220 | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
|
PCM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 4.0 | 4.0 | 1.0 | 4.0 |
| 02 | 9.0 | 1.0 | 3.0 | 0.0 |
| 03 | 1.0 | 2.0 | 0.0 | 10.0 |
| 04 | 0.0 | 0.0 | 0.0 | 13.0 |
| 05 | 0.0 | 0.0 | 13.0 | 0.0 |
| 06 | 0.0 | 0.0 | 0.0 | 13.0 |
| 07 | 0.0 | 0.0 | 0.0 | 13.0 |
| 08 | 0.0 | 0.0 | 0.0 | 13.0 |
| 09 | 13.0 | 0.0 | 0.0 | 0.0 |
| 10 | 0.0 | 0.0 | 1.0 | 12.0 |
| 11 | 2.0 | 0.0 | 3.0 | 8.0 |
| 12 | 0.0 | 4.0 | 0.0 | 9.0 |
PWM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 0.176 | 0.176 | -0.863 | 0.176 |
| 02 | 0.907 | -0.863 | -0.066 | -1.803 |
| 03 | -0.863 | -0.387 | -1.803 | 1.006 |
| 04 | -1.803 | -1.803 | -1.803 | 1.254 |
| 05 | -1.803 | -1.803 | 1.254 | -1.803 |
| 06 | -1.803 | -1.803 | -1.803 | 1.254 |
| 07 | -1.803 | -1.803 | -1.803 | 1.254 |
| 08 | -1.803 | -1.803 | -1.803 | 1.254 |
| 09 | 1.254 | -1.803 | -1.803 | -1.803 |
| 10 | -1.803 | -1.803 | -0.863 | 1.178 |
| 11 | -0.387 | -1.803 | -0.066 | 0.798 |
| 12 | -1.803 | 0.176 | -1.803 | 0.907 |