Model info
| Transcription factor | FOXB1 | ||||||||
| Model | FOXB1_HUMAN.H10MO.D | ||||||||
| Model type | Mononucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Origin | HT-SELEX | ||||||||
| Model length | 17 | ||||||||
| Quality | D | ||||||||
| Consensus | dbvWWTATTTACATWRb | ||||||||
| wAUC | |||||||||
| Best AUC | |||||||||
| Benchmark datasets | |||||||||
| Aligned words | 6619 | ||||||||
| TF family | Forkhead box (FOX) factors{3.3.1} | ||||||||
| TF subfamily | FOXB{3.3.1.2} | ||||||||
| HGNC | 3799 | ||||||||
| EntrezGene | 27023 | ||||||||
| UniProt ID | FOXB1_HUMAN | ||||||||
| UniProt AC | Q99853 | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
|
PCM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 1543.244 | 1144.44 | 2974.01 | 1376.064 |
| 02 | 628.289 | 1012.903 | 1588.797 | 3807.769 |
| 03 | 2490.678 | 2702.984 | 1133.756 | 710.34 |
| 04 | 5652.035 | 387.264 | 397.52 | 600.938 |
| 05 | 5096.696 | 579.613 | 210.897 | 1150.552 |
| 06 | 24.359 | 23.504 | 113.248 | 6876.647 |
| 07 | 4551.058 | 6.624 | 2463.196 | 16.88 |
| 08 | 94.444 | 4.701 | 65.384 | 6873.228 |
| 09 | 94.017 | 1.709 | 188.888 | 6753.143 |
| 10 | 20.726 | 3.632 | 1966.021 | 5047.378 |
| 11 | 6756.562 | 3.419 | 270.085 | 7.692 |
| 12 | 22.008 | 6315.324 | 75.855 | 624.571 |
| 13 | 5453.787 | 99.786 | 235.683 | 1248.501 |
| 14 | 216.88 | 1011.75 | 211.752 | 5597.376 |
| 15 | 5050.369 | 119.444 | 306.623 | 1561.321 |
| 16 | 4037.978 | 442.093 | 1804.483 | 753.203 |
| 17 | 872.007 | 2513.71 | 2302.258 | 1349.783 |
PWM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | -0.131 | -0.429 | 0.524 | -0.245 |
| 02 | -1.027 | -0.551 | -0.102 | 0.771 |
| 03 | 0.347 | 0.429 | -0.439 | -0.905 |
| 04 | 1.166 | -1.509 | -1.483 | -1.072 |
| 05 | 1.063 | -1.108 | -2.112 | -0.424 |
| 06 | -4.194 | -4.227 | -2.725 | 1.362 |
| 07 | 0.95 | -5.295 | 0.336 | -4.525 |
| 08 | -2.903 | -5.54 | -3.26 | 1.362 |
| 09 | -2.907 | -6.107 | -2.221 | 1.344 |
| 10 | -4.341 | -5.708 | 0.111 | 1.053 |
| 11 | 1.345 | -5.745 | -1.867 | -5.181 |
| 12 | -4.287 | 1.277 | -3.116 | -1.033 |
| 13 | 1.13 | -2.849 | -2.002 | -0.343 |
| 14 | -2.085 | -0.552 | -2.108 | 1.156 |
| 15 | 1.054 | -2.673 | -1.741 | -0.119 |
| 16 | 0.83 | -1.377 | 0.025 | -0.847 |
| 17 | -0.701 | 0.356 | 0.269 | -0.265 |