Model info
| Transcription factor | Foxa2 | ||||||||
| Model | FOXA2_MOUSE.H10MO.B | ||||||||
| Model type | Mononucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Origin | ChIP-Seq | ||||||||
| Model length | 12 | ||||||||
| Quality | B | ||||||||
| Consensus | hTRTTTACWYWd | ||||||||
| wAUC | 0.8456285418078173 | ||||||||
| Best AUC | 0.9159253471105573 | ||||||||
| Benchmark datasets | 2 | ||||||||
| Aligned words | 502 | ||||||||
| TF family | Forkhead box (FOX) factors{3.3.1} | ||||||||
| TF subfamily | FOXA{3.3.1.1} | ||||||||
| MGI | 1347476 | ||||||||
| EntrezGene | 15376 | ||||||||
| UniProt ID | FOXA2_MOUSE | ||||||||
| UniProt AC | P35583 | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
|
PCM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 116.818 | 101.876 | 71.353 | 209.953 |
| 02 | 4.469 | 0.0 | 4.083 | 491.447 |
| 03 | 164.813 | 2.835 | 326.486 | 5.867 |
| 04 | 0.0 | 2.838 | 0.0 | 497.162 |
| 05 | 2.122 | 0.0 | 22.059 | 475.819 |
| 06 | 0.0 | 0.0 | 118.563 | 381.437 |
| 07 | 427.525 | 4.181 | 53.24 | 15.055 |
| 08 | 0.0 | 424.879 | 0.0 | 75.121 |
| 09 | 202.813 | 53.83 | 0.931 | 242.425 |
| 10 | 28.249 | 143.246 | 31.386 | 297.119 |
| 11 | 244.166 | 4.803 | 29.199 | 221.833 |
| 12 | 94.37 | 47.669 | 242.916 | 115.045 |
PWM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | -0.067 | -0.202 | -0.551 | 0.514 |
| 02 | -3.045 | -4.4 | -3.111 | 1.36 |
| 03 | 0.274 | -3.362 | 0.952 | -2.836 |
| 04 | -4.4 | -3.361 | -4.4 | 1.371 |
| 05 | -3.539 | -4.4 | -1.679 | 1.328 |
| 06 | -4.4 | -4.4 | -0.052 | 1.107 |
| 07 | 1.221 | -3.094 | -0.837 | -2.031 |
| 08 | -4.4 | 1.215 | -4.4 | -0.501 |
| 09 | 0.479 | -0.826 | -3.93 | 0.656 |
| 10 | -1.446 | 0.135 | -1.346 | 0.859 |
| 11 | 0.664 | -2.991 | -1.415 | 0.568 |
| 12 | -0.277 | -0.944 | 0.658 | -0.082 |