Model info
| Transcription factor | FEV | ||||||||
| Model | FEV_HUMAN.H10MO.C | ||||||||
| Model type | Mononucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Origin | HOCOMOCO v9 | ||||||||
| Model length | 10 | ||||||||
| Quality | C | ||||||||
| Consensus | MMGGAAATdn | ||||||||
| wAUC | |||||||||
| Best AUC | |||||||||
| Benchmark datasets | |||||||||
| Aligned words | 13 | ||||||||
| TF family | Ets-related factors{3.5.2} | ||||||||
| TF subfamily | Ets-like factors{3.5.2.1} | ||||||||
| HGNC | 18562 | ||||||||
| EntrezGene | 54738 | ||||||||
| UniProt ID | FEV_HUMAN | ||||||||
| UniProt AC | Q99581 | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
|
PCM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 2.0 | 9.0 | 1.0 | 1.0 |
| 02 | 9.0 | 3.0 | 1.0 | 0.0 |
| 03 | 0.0 | 0.0 | 13.0 | 0.0 |
| 04 | 0.0 | 0.0 | 13.0 | 0.0 |
| 05 | 13.0 | 0.0 | 0.0 | 0.0 |
| 06 | 12.0 | 0.0 | 0.0 | 1.0 |
| 07 | 7.0 | 0.0 | 6.0 | 0.0 |
| 08 | 0.0 | 0.0 | 0.0 | 13.0 |
| 09 | 5.0 | 0.0 | 4.0 | 4.0 |
| 10 | 5.5 | 2.5 | 2.5 | 2.5 |
PWM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | -0.387 | 0.907 | -0.863 | -0.863 |
| 02 | 0.907 | -0.066 | -0.863 | -1.803 |
| 03 | -1.803 | -1.803 | 1.254 | -1.803 |
| 04 | -1.803 | -1.803 | 1.254 | -1.803 |
| 05 | 1.254 | -1.803 | -1.803 | -1.803 |
| 06 | 1.178 | -1.803 | -1.803 | -0.863 |
| 07 | 0.675 | -1.803 | 0.535 | -1.803 |
| 08 | -1.803 | -1.803 | -1.803 | 1.254 |
| 09 | 0.371 | -1.803 | 0.176 | 0.176 |
| 10 | 0.456 | -0.214 | -0.214 | -0.214 |