Transcription factor | EVX1 | ||||||||
Model | EVX1_HUMAN.H10MO.D | ||||||||
Model type | Mononucleotide PWM | ||||||||
LOGO | ![]() | ||||||||
LOGO (reverse complement) | ![]() | ||||||||
Origin | HT-SELEX | ||||||||
Model length | 20 | ||||||||
Quality | D | ||||||||
Consensus | KnnnnnnATGTTTACTTAAM | ||||||||
wAUC | |||||||||
Best AUC | |||||||||
Benchmark datasets | |||||||||
Aligned words | 6 | ||||||||
TF family | HOX-related factors{3.1.1} | ||||||||
TF subfamily | EVX (Even-skipped homolog){3.1.1.10} | ||||||||
HGNC | 3506 | ||||||||
EntrezGene | 2128 | ||||||||
UniProt ID | EVX1_HUMAN | ||||||||
UniProt AC | P49640 | ||||||||
Comment | |||||||||
Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
Standard thresholds |
|
A | C | G | T | |
---|---|---|---|---|
01 | 0.5 | 0.5 | 1.5 | 3.5 |
02 | 1.5 | 0.5 | 2.5 | 1.5 |
03 | 2.5 | 1.5 | 0.5 | 1.5 |
04 | 1.0 | 1.0 | 1.0 | 3.0 |
05 | 3.0 | 0.0 | 0.0 | 3.0 |
06 | 2.0 | 0.0 | 2.0 | 2.0 |
07 | 1.0 | 1.0 | 1.0 | 3.0 |
08 | 4.0 | 0.0 | 0.0 | 2.0 |
09 | 0.0 | 0.0 | 0.0 | 6.0 |
10 | 1.0 | 0.0 | 5.0 | 0.0 |
11 | 0.0 | 0.0 | 0.0 | 6.0 |
12 | 0.0 | 0.0 | 0.0 | 6.0 |
13 | 0.0 | 0.0 | 1.0 | 5.0 |
14 | 5.0 | 0.0 | 1.0 | 0.0 |
15 | 0.0 | 5.0 | 0.0 | 1.0 |
16 | 1.0 | 0.0 | 0.0 | 5.0 |
17 | 0.0 | 0.0 | 0.0 | 6.0 |
18 | 6.0 | 0.0 | 0.0 | 0.0 |
19 | 4.0 | 0.0 | 0.0 | 2.0 |
20 | 3.0 | 2.0 | 1.0 | 0.0 |
A | C | G | T | |
---|---|---|---|---|
01 | -0.72 | -0.72 | 0.0 | 0.706 |
02 | 0.0 | -0.72 | 0.414 | 0.0 |
03 | 0.414 | 0.0 | -0.72 | 0.0 |
04 | -0.297 | -0.297 | -0.297 | 0.571 |
05 | 0.571 | -1.47 | -1.47 | 0.571 |
06 | 0.228 | -1.47 | 0.228 | 0.228 |
07 | -0.297 | -0.297 | -0.297 | 0.571 |
08 | 0.826 | -1.47 | -1.47 | 0.228 |
09 | -1.47 | -1.47 | -1.47 | 1.197 |
10 | -0.297 | -1.47 | 1.028 | -1.47 |
11 | -1.47 | -1.47 | -1.47 | 1.197 |
12 | -1.47 | -1.47 | -1.47 | 1.197 |
13 | -1.47 | -1.47 | -0.297 | 1.028 |
14 | 1.028 | -1.47 | -0.297 | -1.47 |
15 | -1.47 | 1.028 | -1.47 | -0.297 |
16 | -0.297 | -1.47 | -1.47 | 1.028 |
17 | -1.47 | -1.47 | -1.47 | 1.197 |
18 | 1.197 | -1.47 | -1.47 | -1.47 |
19 | 0.826 | -1.47 | -1.47 | 0.228 |
20 | 0.571 | 0.228 | -0.297 | -1.47 |