Model info
| Transcription factor | ETV6 | ||||||||
| Model | ETV6_HUMAN.H10MO.D | ||||||||
| Model type | Mononucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Origin | HT-SELEX | ||||||||
| Model length | 11 | ||||||||
| Quality | D | ||||||||
| Consensus | dvSCGGAAGTd | ||||||||
| wAUC | |||||||||
| Best AUC | |||||||||
| Benchmark datasets | |||||||||
| Aligned words | 2039 | ||||||||
| TF family | Ets-related factors{3.5.2} | ||||||||
| TF subfamily | ETV6-like factors{3.5.2.6} | ||||||||
| HGNC | 3495 | ||||||||
| EntrezGene | 2120 | ||||||||
| UniProt ID | ETV6_HUMAN | ||||||||
| UniProt AC | P41212 | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
|
PCM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 935.75 | 241.75 | 340.75 | 520.75 |
| 02 | 810.75 | 563.75 | 405.75 | 258.75 |
| 03 | 182.75 | 1142.75 | 552.75 | 160.75 |
| 04 | 159.0 | 1725.0 | 99.0 | 56.0 |
| 05 | 1.0 | 0.0 | 2038.0 | 0.0 |
| 06 | 1.0 | 1.0 | 2032.0 | 5.0 |
| 07 | 2032.0 | 0.0 | 5.0 | 2.0 |
| 08 | 2026.5 | 0.5 | 3.5 | 8.5 |
| 09 | 350.0 | 11.0 | 1674.0 | 4.0 |
| 10 | 24.5 | 150.5 | 43.5 | 1820.5 |
| 11 | 709.75 | 173.75 | 828.75 | 326.75 |
PWM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 0.606 | -0.742 | -0.401 | 0.021 |
| 02 | 0.463 | 0.1 | -0.227 | -0.674 |
| 03 | -1.019 | 0.805 | 0.081 | -1.146 |
| 04 | -1.157 | 1.216 | -1.623 | -2.179 |
| 05 | -5.171 | -5.593 | 1.383 | -5.593 |
| 06 | -5.171 | -5.171 | 1.38 | -4.305 |
| 07 | 1.38 | -5.593 | -4.305 | -4.875 |
| 08 | 1.377 | -5.36 | -4.55 | -3.895 |
| 09 | -0.374 | -3.68 | 1.186 | -4.462 |
| 10 | -2.964 | -1.211 | -2.422 | 1.27 |
| 11 | 0.33 | -1.069 | 0.485 | -0.443 |