Model info
| Transcription factor | ETV5 | ||||||||
| Model | ETV5_HUMAN.H10MO.D | ||||||||
| Model type | Mononucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Origin | HOCOMOCO v9 | ||||||||
| Model length | 13 | ||||||||
| Quality | D | ||||||||
| Consensus | SMSMGGAdSdWMY | ||||||||
| wAUC | |||||||||
| Best AUC | |||||||||
| Benchmark datasets | |||||||||
| Aligned words | 15 | ||||||||
| TF family | Ets-related factors{3.5.2} | ||||||||
| TF subfamily | Elk-like factors{3.5.2.2} | ||||||||
| HGNC | 3494 | ||||||||
| EntrezGene | 2119 | ||||||||
| UniProt ID | ETV5_HUMAN | ||||||||
| UniProt AC | P41161 | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
|
PCM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 2.51 | 3.455 | 8.297 | 0.738 |
| 02 | 6.614 | 4.252 | 0.0 | 4.134 |
| 03 | 1.654 | 9.449 | 3.898 | 0.0 |
| 04 | 9.685 | 4.134 | 0.0 | 1.181 |
| 05 | 1.535 | 0.0 | 13.465 | 0.0 |
| 06 | 0.0 | 1.181 | 13.819 | 0.0 |
| 07 | 13.228 | 1.772 | 0.0 | 0.0 |
| 08 | 8.976 | 1.772 | 2.126 | 2.126 |
| 09 | 1.181 | 2.717 | 10.512 | 0.591 |
| 10 | 4.252 | 1.654 | 2.362 | 6.732 |
| 11 | 8.858 | 1.772 | 0.0 | 4.37 |
| 12 | 10.394 | 2.126 | 0.945 | 1.535 |
| 13 | 0.148 | 7.352 | 1.211 | 6.289 |
PWM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | -0.329 | -0.069 | 0.707 | -1.14 |
| 02 | 0.499 | 0.107 | -1.878 | 0.083 |
| 03 | -0.642 | 0.827 | 0.033 | -1.878 |
| 04 | 0.85 | 0.083 | -1.878 | -0.868 |
| 05 | -0.694 | -1.878 | 1.161 | -1.878 |
| 06 | -1.878 | -0.868 | 1.186 | -1.878 |
| 07 | 1.145 | -0.592 | -1.878 | -1.878 |
| 08 | 0.78 | -0.592 | -0.457 | -0.457 |
| 09 | -0.868 | -0.266 | 0.927 | -1.251 |
| 10 | 0.107 | -0.642 | -0.376 | 0.515 |
| 11 | 0.767 | -0.592 | -1.878 | 0.131 |
| 12 | 0.917 | -0.457 | -1.004 | -0.694 |
| 13 | -1.681 | 0.595 | -0.852 | 0.453 |