Model info
| Transcription factor | ETV3 | ||||||||
| Model | ETV3_HUMAN.H10MO.D | ||||||||
| Model type | Mononucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Origin | HT-SELEX | ||||||||
| Model length | 14 | ||||||||
| Quality | D | ||||||||
| Consensus | dnhdTdTGCACYTY | ||||||||
| wAUC | |||||||||
| Best AUC | |||||||||
| Benchmark datasets | |||||||||
| Aligned words | 12 | ||||||||
| TF family | Ets-related factors{3.5.2} | ||||||||
| TF subfamily | Ets-like factors{3.5.2.1} | ||||||||
| HGNC | 3492 | ||||||||
| EntrezGene | 2117 | ||||||||
| UniProt ID | ETV3_HUMAN | ||||||||
| UniProt AC | P41162 | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
|
PCM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 2.5 | 0.5 | 3.5 | 5.5 |
| 02 | 5.0 | 2.0 | 2.0 | 3.0 |
| 03 | 3.0 | 6.0 | 1.0 | 2.0 |
| 04 | 5.0 | 0.0 | 5.0 | 2.0 |
| 05 | 2.0 | 0.0 | 1.0 | 9.0 |
| 06 | 2.0 | 0.0 | 2.0 | 8.0 |
| 07 | 0.0 | 1.0 | 1.0 | 10.0 |
| 08 | 2.0 | 1.0 | 9.0 | 0.0 |
| 09 | 0.0 | 10.0 | 1.0 | 1.0 |
| 10 | 10.0 | 0.0 | 2.0 | 0.0 |
| 11 | 0.0 | 10.0 | 1.0 | 1.0 |
| 12 | 0.0 | 3.0 | 2.0 | 7.0 |
| 13 | 1.0 | 0.0 | 2.0 | 9.0 |
| 14 | 0.0 | 7.0 | 2.0 | 3.0 |
PWM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | -0.149 | -1.172 | 0.129 | 0.525 |
| 02 | 0.44 | -0.323 | -0.323 | 0.0 |
| 03 | 0.0 | 0.603 | -0.804 | -0.323 |
| 04 | 0.44 | -1.763 | 0.44 | -0.323 |
| 05 | -0.323 | -1.763 | -0.804 | 0.977 |
| 06 | -0.323 | -1.763 | -0.323 | 0.867 |
| 07 | -1.763 | -0.804 | -0.804 | 1.076 |
| 08 | -0.323 | -0.804 | 0.977 | -1.763 |
| 09 | -1.763 | 1.076 | -0.804 | -0.804 |
| 10 | 1.076 | -1.763 | -0.323 | -1.763 |
| 11 | -1.763 | 1.076 | -0.804 | -0.804 |
| 12 | -1.763 | 0.0 | -0.323 | 0.744 |
| 13 | -0.804 | -1.763 | -0.323 | 0.977 |
| 14 | -1.763 | 0.744 | -0.323 | 0.0 |