Model info
| Transcription factor | ETV2 | ||||||||
| Model | ETV2_HUMAN.H10MO.D | ||||||||
| Model type | Mononucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Origin | HT-SELEX | ||||||||
| Model length | 11 | ||||||||
| Quality | D | ||||||||
| Consensus | nnbbRTTWhnn | ||||||||
| wAUC | |||||||||
| Best AUC | |||||||||
| Benchmark datasets | |||||||||
| Aligned words | 908 | ||||||||
| TF family | Ets-related factors{3.5.2} | ||||||||
| TF subfamily | Ets-like factors{3.5.2.1} | ||||||||
| HGNC | 3491 | ||||||||
| EntrezGene | 2116 | ||||||||
| UniProt ID | ETV2_HUMAN | ||||||||
| UniProt AC | O00321 | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
|
PCM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 173.75 | 187.75 | 173.75 | 371.75 |
| 02 | 173.25 | 270.25 | 186.25 | 277.25 |
| 03 | 137.75 | 365.75 | 147.75 | 255.75 |
| 04 | 94.0 | 148.0 | 360.0 | 305.0 |
| 05 | 291.0 | 125.0 | 491.0 | 0.0 |
| 06 | 0.0 | 0.0 | 0.0 | 907.0 |
| 07 | 0.0 | 0.0 | 0.0 | 907.0 |
| 08 | 106.25 | 42.25 | 56.25 | 702.25 |
| 09 | 175.0 | 213.0 | 132.0 | 387.0 |
| 10 | 190.25 | 238.25 | 178.25 | 300.25 |
| 11 | 215.75 | 148.75 | 220.75 | 321.75 |
PWM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | -0.264 | -0.187 | -0.264 | 0.491 |
| 02 | -0.267 | 0.174 | -0.195 | 0.2 |
| 03 | -0.494 | 0.475 | -0.424 | 0.12 |
| 04 | -0.87 | -0.423 | 0.459 | 0.295 |
| 05 | 0.248 | -0.589 | 0.769 | -4.899 |
| 06 | -4.899 | -4.899 | -4.899 | 1.381 |
| 07 | -4.899 | -4.899 | -4.899 | 1.381 |
| 08 | -0.75 | -1.648 | -1.372 | 1.125 |
| 09 | -0.257 | -0.062 | -0.536 | 0.531 |
| 10 | -0.174 | 0.049 | -0.239 | 0.279 |
| 11 | -0.049 | -0.418 | -0.027 | 0.348 |