Model info
| Transcription factor | Esr1 | ||||||||
| Model | ESR1_MOUSE.H10MO.B | ||||||||
| Model type | Mononucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Origin | HOCOMOCO v9 | ||||||||
| Model length | 18 | ||||||||
| Quality | B | ||||||||
| Consensus | RRGTCAbvbYSvCCYbvv | ||||||||
| wAUC | |||||||||
| Best AUC | |||||||||
| Benchmark datasets | |||||||||
| Aligned words | 568 | ||||||||
| TF family | Steroid hormone receptors (NR3){2.1.1} | ||||||||
| TF subfamily | ER-like receptors (NR3A&B){2.1.1.2} | ||||||||
| MGI | 1352467 | ||||||||
| EntrezGene | 13982 | ||||||||
| UniProt ID | ESR1_MOUSE | ||||||||
| UniProt AC | P19785 | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
|
PCM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 275.868 | 53.478 | 168.839 | 26.511 |
| 02 | 69.488 | 14.188 | 381.24 | 59.78 |
| 03 | 9.275 | 7.46 | 503.338 | 4.623 |
| 04 | 7.312 | 19.558 | 64.337 | 433.489 |
| 05 | 1.441 | 480.252 | 28.833 | 14.17 |
| 06 | 475.044 | 14.199 | 8.407 | 27.047 |
| 07 | 38.375 | 210.567 | 207.038 | 68.717 |
| 08 | 104.84 | 136.872 | 208.747 | 74.237 |
| 09 | 75.87 | 133.262 | 222.806 | 92.758 |
| 10 | 43.378 | 67.777 | 16.587 | 396.955 |
| 11 | 40.752 | 60.674 | 411.874 | 11.396 |
| 12 | 274.17 | 128.634 | 68.35 | 53.542 |
| 13 | 19.706 | 426.793 | 33.588 | 44.609 |
| 14 | 17.469 | 452.046 | 18.345 | 36.837 |
| 15 | 66.224 | 130.075 | 12.29 | 316.107 |
| 16 | 58.142 | 113.582 | 238.238 | 114.734 |
| 17 | 151.809 | 87.043 | 207.957 | 77.887 |
| 18 | 91.102 | 170.558 | 190.541 | 72.496 |
PWM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 0.737 | -0.88 | 0.25 | -1.553 |
| 02 | -0.625 | -2.131 | 1.059 | -0.772 |
| 03 | -2.505 | -2.688 | 1.336 | -3.066 |
| 04 | -2.705 | -1.838 | -0.7 | 1.187 |
| 05 | -3.788 | 1.289 | -1.474 | -2.132 |
| 06 | 1.278 | -2.131 | -2.589 | -1.535 |
| 07 | -1.201 | 0.469 | 0.452 | -0.636 |
| 08 | -0.221 | 0.042 | 0.46 | -0.56 |
| 09 | -0.539 | 0.016 | 0.525 | -0.342 |
| 10 | -1.083 | -0.649 | -1.99 | 1.099 |
| 11 | -1.143 | -0.757 | 1.136 | -2.326 |
| 12 | 0.731 | -0.019 | -0.641 | -0.879 |
| 13 | -1.831 | 1.172 | -1.329 | -1.056 |
| 14 | -1.942 | 1.229 | -1.897 | -1.24 |
| 15 | -0.672 | -0.008 | -2.26 | 0.873 |
| 16 | -0.799 | -0.142 | 0.591 | -0.132 |
| 17 | 0.144 | -0.404 | 0.456 | -0.513 |
| 18 | -0.359 | 0.26 | 0.37 | -0.583 |