Model info
| Transcription factor | Esrrg | ||||||||
| Model | ERR3_MOUSE.H10MO.B | ||||||||
| Model type | Mononucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Origin | HOCOMOCO v9 | ||||||||
| Model length | 9 | ||||||||
| Quality | B | ||||||||
| Consensus | TYAAGGTCA | ||||||||
| wAUC | |||||||||
| Best AUC | |||||||||
| Benchmark datasets | |||||||||
| Aligned words | 14 | ||||||||
| TF family | Steroid hormone receptors (NR3){2.1.1} | ||||||||
| TF subfamily | ER-like receptors (NR3A&B){2.1.1.2} | ||||||||
| MGI | 1347056 | ||||||||
| EntrezGene | 26381 | ||||||||
| UniProt ID | ERR3_MOUSE | ||||||||
| UniProt AC | P62509 | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
|
PCM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 0.977 | 0.0 | 2.062 | 10.961 |
| 02 | 0.977 | 9.984 | 0.977 | 2.062 |
| 03 | 11.07 | 0.0 | 2.93 | 0.0 |
| 04 | 14.0 | 0.0 | 0.0 | 0.0 |
| 05 | 0.0 | 0.977 | 12.047 | 0.977 |
| 06 | 0.0 | 0.977 | 13.023 | 0.0 |
| 07 | 0.977 | 0.0 | 0.0 | 13.023 |
| 08 | 0.977 | 11.07 | 0.0 | 1.953 |
| 09 | 11.558 | 0.488 | 1.465 | 0.488 |
PWM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | -0.933 | -1.841 | -0.424 | 1.027 |
| 02 | -0.933 | 0.94 | -0.933 | -0.424 |
| 03 | 1.037 | -1.841 | -0.147 | -1.841 |
| 04 | 1.26 | -1.841 | -1.841 | -1.841 |
| 05 | -1.841 | -0.933 | 1.117 | -0.933 |
| 06 | -1.841 | -0.933 | 1.191 | -1.841 |
| 07 | -0.933 | -1.841 | -1.841 | 1.191 |
| 08 | -0.933 | 1.037 | -1.841 | -0.465 |
| 09 | 1.077 | -1.287 | -0.672 | -1.287 |