Model info
| Transcription factor | Esrrb | ||||||||
| Model | ERR2_MOUSE.H10MO.B | ||||||||
| Model type | Mononucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Origin | HOCOMOCO v9 | ||||||||
| Model length | 9 | ||||||||
| Quality | B | ||||||||
| Consensus | bSAAGGTCA | ||||||||
| wAUC | 0.9533452485355083 | ||||||||
| Best AUC | 0.9533452485355083 | ||||||||
| Benchmark datasets | 1 | ||||||||
| Aligned words | 3687 | ||||||||
| TF family | Steroid hormone receptors (NR3){2.1.1} | ||||||||
| TF subfamily | ER-like receptors (NR3A&B){2.1.1.2} | ||||||||
| MGI | 1346832 | ||||||||
| EntrezGene | 26380 | ||||||||
| UniProt ID | ERR2_MOUSE | ||||||||
| UniProt AC | Q61539 | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
|
PCM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 215.365 | 1110.082 | 619.69 | 1717.005 |
| 02 | 248.357 | 2605.043 | 524.445 | 284.297 |
| 03 | 3421.476 | 23.277 | 198.16 | 19.229 |
| 04 | 3611.742 | 2.227 | 42.709 | 5.465 |
| 05 | 20.241 | 1.619 | 3621.66 | 18.622 |
| 06 | 8.906 | 5.667 | 3639.472 | 8.096 |
| 07 | 142.294 | 147.216 | 323.905 | 3048.726 |
| 08 | 6.882 | 3210.639 | 262.793 | 181.828 |
| 09 | 3397.528 | 18.015 | 222.918 | 23.682 |
PWM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | -1.44 | 0.192 | -0.389 | 0.628 |
| 02 | -1.299 | 1.044 | -0.556 | -1.165 |
| 03 | 1.317 | -3.59 | -1.522 | -3.764 |
| 04 | 1.371 | -5.368 | -3.02 | -4.805 |
| 05 | -3.717 | -5.521 | 1.374 | -3.793 |
| 06 | -4.428 | -4.778 | 1.378 | -4.504 |
| 07 | -1.85 | -1.816 | -1.035 | 1.201 |
| 08 | -4.632 | 1.253 | -1.243 | -1.607 |
| 09 | 1.31 | -3.823 | -1.406 | -3.574 |